Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_K21
         (367 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   3.4  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   3.4  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    20   8.0  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    20   8.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    20   8.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    20   8.0  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 43  ESPPAGRLPAEMPQYFEDYPRQAPGPARESGH 138
           E+ P    P  +PQ    +PR    P  E G+
Sbjct: 95  EAEPGNNRPVYIPQPRPPHPRLRREPEAEPGN 126



 Score = 21.4 bits (43), Expect = 3.4
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 43  ESPPAGRLPAEMPQYFEDYPRQAPGPARESGH 138
           E+ P    P  +PQ    +PR    P  E G+
Sbjct: 121 EAEPGNNRPVYIPQPRPPHPRLRREPEAEPGN 152


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
          acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 80 GISAGSRPAGGDSQP 36
          G  AG RPA   SQP
Sbjct: 16 GYDAGVRPAENSSQP 30


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 92  KTIRDRHLDLPGNPVTCYHMKTLL 163
           K +    + +P + +  YH KTLL
Sbjct: 98  KKVTFHEMSIPNHYLWLYHDKTLL 121


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 363 ASRLVFAAFYSAVGDF 316
           ASR+VF  F+ A+  F
Sbjct: 426 ASRIVFPLFFLAINVF 441


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +2

Query: 107 RHLDLPGNPVTCYHMKTLLLYE 172
           R L LPG  V C   K L L E
Sbjct: 308 RELQLPGCEVLCPLYKYLQLIE 329


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +2

Query: 107 RHLDLPGNPVTCYHMKTLLLYE 172
           R L LPG  V C   K L L E
Sbjct: 323 RELQLPGCEVLCPLYKYLQLIE 344


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,901
Number of Sequences: 438
Number of extensions: 2402
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)