Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_K20
(214 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0345 + 16876489-16876614,16876718-16876876,16877989-168781... 38 0.001
03_02_0621 - 9923163-9923245,9924163-9924338,9924437-9924495,992... 35 0.008
05_01_0410 - 3234455-3234466,3234851-3234950,3235037-3235161,323... 29 0.39
02_01_0001 - 3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,6... 29 0.68
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 28 0.89
01_03_0119 + 12709976-12710057,12710157-12710230,12710312-127108... 28 0.89
04_01_0299 - 3995709-3996185,3996209-3997075,3997142-3997252,399... 27 2.1
07_03_0651 + 20287661-20287701,20288034-20288124,20288737-202888... 27 2.7
12_02_0396 + 18577574-18578056,18578094-18578723 26 3.6
11_06_0382 - 22943583-22943710,22944283-22944397 26 4.8
02_03_0272 - 17146578-17146691,17146806-17146926,17147260-171473... 26 4.8
01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383... 26 4.8
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 25 6.3
10_01_0163 - 1850018-1850033,1850184-1850271,1850824-1854544 25 6.3
09_02_0217 - 5881143-5881178,5883047-5883174,5883225-5883269,588... 25 6.3
04_04_0877 + 29018168-29018279,29019013-29019230,29019333-29019713 25 6.3
03_02_0544 - 9362615-9362674,9362783-9362857,9362934-9363144,936... 25 6.3
02_01_0340 + 2415272-2415486,2415883-2416308,2416313-2417243 25 6.3
10_01_0165 - 1869312-1869449,1870486-1872326,1872356-1872719 25 8.3
07_01_1091 - 10015180-10015236,10015705-10015779,10015874-100161... 25 8.3
06_03_0440 + 20815528-20815653,20815742-20815912,20816501-208165... 25 8.3
05_04_0333 + 20333243-20333329,20335048-20335110,20335276-203353... 25 8.3
05_03_0407 + 13582595-13582681,13583067-13583129,13583289-135833... 25 8.3
>09_04_0345 +
16876489-16876614,16876718-16876876,16877989-16878102,
16878701-16878882,16879142-16879241,16879597-16879638,
16879818-16879994,16880084-16880175,16880633-16880779,
16880832-16881036
Length = 447
Score = 37.5 bits (83), Expect = 0.001
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +2
Query: 14 TTGDWFVMFYGASCVECQRLHGVWESVGASLRGRINVARIDANLAGLNTAKRFQVTKLPT 193
+ G V F+ C CQ+L +WE L+G VA +DA+ A A+ + + PT
Sbjct: 46 SNGVVLVEFFAPWCGHCQQLTPIWEKAAGVLKGVATVAALDAD-AHKELAQEYGIRGFPT 104
Query: 194 FLFF 205
F
Sbjct: 105 IKVF 108
Score = 33.5 bits (73), Expect = 0.024
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +2
Query: 26 WFVMFYGASCVECQRLHGVWESVGASLRGRINVARIDAN 142
W V F+ C C++L W+ +L+G++ + +D +
Sbjct: 186 WIVEFFAPWCGHCKKLAPEWKKAAKNLKGQVKLGHVDCD 224
>03_02_0621 -
9923163-9923245,9924163-9924338,9924437-9924495,
9924952-9924984,9925060-9925185
Length = 158
Score = 35.1 bits (77), Expect = 0.008
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 26 WFVMFYGASCVECQRLHGVWESVGASLRG--RINVARIDANLAGLNTAKRFQVTKLPTFL 199
WFV F C C+ L +WE +G + G I + ++D ++ + + PTF
Sbjct: 61 WFVKFCVPWCKHCKNLGTLWEDLGKVMEGADEIEIGQVDCGVS-KPVCSKVDIHSYPTFK 119
Query: 200 FFRLG 214
F G
Sbjct: 120 VFYEG 124
>05_01_0410 -
3234455-3234466,3234851-3234950,3235037-3235161,
3235244-3235400,3235644-3235735,3235828-3235855,
3235949-3236066,3236411-3236466,3236556-3236653,
3236864-3236948,3237428-3237600
Length = 347
Score = 29.5 bits (63), Expect = 0.39
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 32 VMFYGASCVECQRLHGVWESVGASLR--GRINVARIDANLAGLNTAKRFQVTKLPTFLFF 205
V FY C C++L +E +GAS + + +A++D + + ++ V+ PT +F
Sbjct: 52 VEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCD-EHKSVCSKYGVSGYPTIQWF 110
Query: 206 RLG 214
G
Sbjct: 111 PKG 113
>02_01_0001 -
3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,
6419-6493,6619-6705,6873-6953,7021-7163,7262-7430,
7538-7667,7753-8255
Length = 577
Score = 28.7 bits (61), Expect = 0.68
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +2
Query: 41 YGASCVECQRLHGVWESVGASLRG--RINVARIDANLAGLNTAKRFQVTKLPTFLFFRLG 214
Y C CQ L + +G LRG + +A++D N R + PT LF+ G
Sbjct: 454 YAPWCGHCQELEPTYNKLGKHLRGIDSLVIAKMDGT---ANEHPRAKPDGFPTILFYPAG 510
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 28.3 bits (60), Expect = 0.89
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +2
Query: 38 FYGASCVECQRLHGVWESVGASLRGRINVARIDANLAGLNTAKRFQVTKLPTFLFFRLG 214
FY C CQ+L + E V SL+ +V + + F V P+ F+ G
Sbjct: 395 FYAPWCGHCQKLAPILEEVAVSLKDDEDVVIAKMDGTANDVPSDFAVEGYPSMYFYSSG 453
>01_03_0119 +
12709976-12710057,12710157-12710230,12710312-12710809,
12711520-12712095,12712181-12712288,12712349-12712393,
12712614-12713342
Length = 703
Score = 28.3 bits (60), Expect = 0.89
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +2
Query: 74 HGVWESVGASLRGRINVARIDANLAGLNTAKRFQVTKLPTFLFF 205
+GVW S +S ++++A DAN AKR TK P FLFF
Sbjct: 372 YGVWSS-SSSGNSKLDIAFKDAN----RIAKR-NSTKCPVFLFF 409
>04_01_0299 -
3995709-3996185,3996209-3997075,3997142-3997252,
3997535-3997888
Length = 602
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 205 EEKESWQFSYLKPLSSI*TSKVCINSGNIYTASQTCPYTFPDSM 74
++ E W +K L S T +VC N+G+ + CP T ++M
Sbjct: 172 DDHEKWPQGTVKALDSHVTCEVCGNTGH---SGNDCPETHEEAM 212
>07_03_0651 +
20287661-20287701,20288034-20288124,20288737-20288831,
20289433-20289523,20290066-20290250,20290590-20290647,
20290812-20290852,20290935-20291009,20292298-20292354,
20292480-20292546,20292754-20292900,20292986-20293210,
20293332-20293493,20293570-20293647,20293735-20293812
Length = 496
Score = 26.6 bits (56), Expect = 2.7
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 8/69 (11%)
Frame = +2
Query: 32 VMFYGASCVECQRLHGVWESVGASLR--------GRINVARIDANLAGLNTAKRFQVTKL 187
V FY C RL WE +R GRI +A++D ++ +R +
Sbjct: 174 VNFYAPWCYWSNRLKPSWEKTAKIMRERYDPEMDGRIILAKVDCT-EEIDLCRRHHIQGY 232
Query: 188 PTFLFFRLG 214
P+ FR G
Sbjct: 233 PSIRIFRKG 241
>12_02_0396 + 18577574-18578056,18578094-18578723
Length = 370
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 205 EEKESWQFSYLKPLSSI*TSKVCINSGNIYTASQTCPYTFPDSM 74
++ E W +K L S T +VC N+G+ + CP T ++M
Sbjct: 84 DDHEKWPQGTVKALDSHVTCEVCGNTGH---SGNDCPKTREEAM 124
>11_06_0382 - 22943583-22943710,22944283-22944397
Length = 80
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 20 GDWFVMFYGASCVECQRLHGVWESVGASLRGR 115
G FV YG CV RL+ +W+ + GR
Sbjct: 20 GTIFVNVYGYGCVVNVRLYEIWKVGNGCIIGR 51
>02_03_0272 -
17146578-17146691,17146806-17146926,17147260-17147365,
17147469-17147551,17147688-17147815,17147897-17147983,
17148064-17148174,17148502-17148669,17148753-17148837,
17148921-17149037,17149127-17149203,17149299-17149370,
17150538-17150634,17150750-17150952,17151115-17151217,
17151324-17151391,17151461-17151514,17151595-17151704,
17151982-17152060,17152171-17152233,17153410-17153529,
17153913-17153969,17154071-17154187,17156426-17156476,
17156591-17156689,17156787-17156935,17158090-17158312
Length = 953
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 171 NLLAVFKPA-RFASILATFIRPLRLAPTLSQTPCNL*HSTQ 52
NL + +K + + + ++ + LRL P + CNL H+ Q
Sbjct: 491 NLASAYKDSGHVETAIVSYKQALRLRPDFPEATCNLLHTLQ 531
>01_03_0161 +
13337265-13337297,13337880-13338017,13338211-13338308,
13338395-13338450,13338664-13338781,13338889-13338916,
13339021-13339112,13339321-13339477,13339569-13339693,
13339785-13339884,13339991-13340059
Length = 337
Score = 25.8 bits (54), Expect = 4.8
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 41 YGASCVECQRLHGVWESVGASLR--GRINVARIDANLAGLNTAKRFQVTKLPTFLFFRLG 214
Y C C++L +E +GAS + + +A++D + + ++ V+ PT +F G
Sbjct: 26 YLVRCGHCKKLAPEYEKLGASFKKAKSVFIAKVDCD-EHKSVCSKYGVSGYPTIQWFPKG 84
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/57 (22%), Positives = 22/57 (38%)
Frame = +2
Query: 32 VMFYGASCVECQRLHGVWESVGASLRGRINVARIDANLAGLNTAKRFQVTKLPTFLF 202
V FY C C++L + + +L+ +V + + F V PT F
Sbjct: 407 VEFYAPWCGHCKKLAPILDEAATTLKSDKDVVIAKMDATANDVPSEFDVQGYPTLYF 463
>10_01_0163 - 1850018-1850033,1850184-1850271,1850824-1854544
Length = 1274
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 26 WFVMFYGASCVECQRLHGVWESVGASLRGRINVARIDANLAGLNTAKR 169
+F++ ASC + +H + S LRG NV++ A A L ++
Sbjct: 679 YFIVGASASCSTLREVHSLNLSGELELRGLENVSQEQAKAANLGRKEK 726
>09_02_0217 -
5881143-5881178,5883047-5883174,5883225-5883269,
5883473-5883560,5883608-5883670,5883741-5883848,
5884428-5884466,5884750-5884866,5885498-5885578,
5886228-5886230
Length = 235
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 136 INSGNIYTASQTCPYTFPDSMQSL 65
+ + NI+T Q C TFP + + L
Sbjct: 195 VTTDNIFTLQQWCSTTFPQAKEQL 218
>04_04_0877 + 29018168-29018279,29019013-29019230,29019333-29019713
Length = 236
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 29 FVMFYGASCVECQRLHGVWESVGASL 106
FV G C+ECQ HG +G L
Sbjct: 195 FVTEKGTPCLECQDSHGTAWGIGGYL 220
>03_02_0544 -
9362615-9362674,9362783-9362857,9362934-9363144,
9363279-9363403,9363492-9363593,9363676-9363738,
9363817-9363897,9364248-9364359,9364454-9364626,
9364722-9364829,9364909-9364992,9365131-9365193,
9365652-9365738
Length = 447
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 146 QGLHQFWQHLYGLSDLPLHFPRLHAI 69
QG + LYGL++LP F RL A+
Sbjct: 219 QGGSPYIYPLYGLAELPQAFARLSAV 244
>02_01_0340 + 2415272-2415486,2415883-2416308,2416313-2417243
Length = 523
Score = 25.4 bits (53), Expect = 6.3
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 20 GDWFVMFYGASCVECQRLHGVWESVGASLRGRINVARIDANLAGL----NTAKRFQVTKL 187
GDW + F G+SC L S A+ + I N +G+ KRF TK
Sbjct: 98 GDWALPFRGSSCRRAAALADRIYSSFANANPISRLGTIPNNRSGILEKKKAKKRFGKTKN 157
Query: 188 PTFLF 202
FL+
Sbjct: 158 RRFLY 162
>10_01_0165 - 1869312-1869449,1870486-1872326,1872356-1872719
Length = 780
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 26 WFVMFYGASCVECQRLHGVWESVGASLRGRINVARIDANLAGLNTAKR 169
+FV+ + C + LH + LRG NV++ DA A L ++
Sbjct: 651 YFVVGASSGCSTLRELHSLNLCGELELRGLENVSQEDAKAANLRNKEK 698
>07_01_1091 -
10015180-10015236,10015705-10015779,10015874-10016149,
10016204-10016332,10017070-10017171,10017626-10017688,
10017776-10017856,10018218-10018314,10019064-10019236,
10019327-10019434,10019706-10019789,10019985-10020047,
10020483-10020569
Length = 464
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 146 QGLHQFWQHLYGLSDLPLHFPRLHAI 69
QG + LYGL +LP F RL A+
Sbjct: 214 QGGSPYIYPLYGLGELPQGFARLSAV 239
>06_03_0440 +
20815528-20815653,20815742-20815912,20816501-20816584,
20818831-20818917,20819044-20819076
Length = 166
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 6 RVQLLEIGLLCFMERLVLNV 65
RVQLL +G CF+ R VL +
Sbjct: 99 RVQLLSVGNGCFVSRGVLGI 118
>05_04_0333 +
20333243-20333329,20335048-20335110,20335276-20335359,
20335720-20335827,20335969-20336141,20337135-20337246,
20337468-20337548,20337635-20337697,20337779-20337880,
20338070-20338194,20338317-20338527,20338625-20338699,
20338990-20339043
Length = 445
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 146 QGLHQFWQHLYGLSDLPLHFPRLHAI 69
QG + LYGL +LP F RL A+
Sbjct: 219 QGGSPYIYPLYGLGELPQGFARLSAV 244
>05_03_0407 +
13582595-13582681,13583067-13583129,13583289-13583372,
13583757-13583864,13584018-13584190,13585190-13585301,
13585424-13585504,13585611-13585673,13585764-13585865,
13586063-13586187,13586316-13586526,13586614-13586688,
13586950-13587003
Length = 445
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 146 QGLHQFWQHLYGLSDLPLHFPRLHAI 69
QG + LYGL +LP F RL A+
Sbjct: 219 QGGSPYIYPLYGLGELPQGFARLSAV 244
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,871,261
Number of Sequences: 37544
Number of extensions: 98919
Number of successful extensions: 257
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 14,793,348
effective HSP length: 50
effective length of database: 12,916,148
effective search space used: 258322960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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