Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_K20
(214 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 52 7e-08
U88167-3|AAB42224.2| 363|Caenorhabditis elegans Hypothetical pr... 46 4e-06
Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical pr... 44 2e-05
U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily ass... 42 5e-05
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 35 0.009
Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical pr... 34 0.012
U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulph... 34 0.012
AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical... 33 0.037
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 32 0.048
U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfi... 32 0.048
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 32 0.048
AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical ... 32 0.048
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 32 0.064
AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-l... 31 0.15
AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : short... 31 0.15
Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical pr... 29 0.59
AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical ... 29 0.59
Z93383-14|CAB07631.2| 279|Caenorhabditis elegans Hypothetical p... 27 1.4
U40028-10|AAA81121.3| 363|Caenorhabditis elegans Serpentine rec... 27 1.4
AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin reu... 27 1.4
AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of... 27 1.4
Z81555-6|CAJ85762.1| 709|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z81555-5|CAB04517.2| 694|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z66564-1|CAA91471.1| 329|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z99710-6|CAB16869.1| 362|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical p... 25 5.5
Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical p... 25 5.5
Z77135-2|CAB00879.1| 769|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical pr... 25 5.5
U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein. 25 5.5
Z81130-5|CAB03420.1| 361|Caenorhabditis elegans Hypothetical pr... 25 7.3
U53338-3|AAA96191.1| 534|Caenorhabditis elegans Ammonium transp... 25 7.3
AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical... 25 7.3
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 25 9.7
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF022973-3|AAC25799.1| 551|Caenorhabditis elegans Asparaginyl t... 25 9.7
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 51.6 bits (118), Expect = 7e-08
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 20 GDWFVMFYGASCVECQRLHGVWESVGASLRGR---INVARIDANLAGLNTAKRFQVTKLP 190
G WFV FY C C+RLH VW+ VG +L I V ++D A + + P
Sbjct: 44 GMWFVEFYAPWCAHCKRLHPVWDQVGHTLSDSNLPIRVGKLDCTRFPA-VANKLSIQGYP 102
Query: 191 TFLFFRLG 214
T LFFR G
Sbjct: 103 TILFFRNG 110
>U88167-3|AAB42224.2| 363|Caenorhabditis elegans Hypothetical
protein D2092.4 protein.
Length = 363
Score = 46.0 bits (104), Expect = 4e-06
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 23 DWFVMFYGASCVECQRLHGVWESVGASLRGRINVARIDANLAGLNTAKRFQVTK--LPTF 196
DWFVMFY A +WE+V LRG +NV +I+ ++ + +RF + + P F
Sbjct: 208 DWFVMFYDADEGNSNAFVPLWETVAHKLRGLVNVGKIEISVND-DVTERFHIEERDCPVF 266
Query: 197 LFFRLG 214
L F G
Sbjct: 267 LLFHRG 272
>Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical
protein Y49E10.4 protein.
Length = 436
Score = 43.6 bits (98), Expect = 2e-05
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 26 WFVMFYGASCVECQRLHGVWESVGASLRGRINVARIDANLAGLNTAKRFQVTKLPTFLFF 205
W V F+ C CQ+L W+ + GR+ +DA A + A++F + PT FF
Sbjct: 175 WMVEFFAPWCGHCQKLEPEWKKAAEEMGGRVKFGALDAT-AHESIAQKFGIRGFPTIKFF 233
Query: 206 RLG 214
G
Sbjct: 234 APG 236
Score = 28.7 bits (61), Expect = 0.59
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = +2
Query: 26 WFVMFYGASCVECQRLHGVWESVGASLRGRINVARIDANLAGLNTAKRFQVTKLPTFLFF 205
W V FY C C+ L ++ L+G + IDA + ++ + PT F
Sbjct: 45 WIVEFYAPYCGHCKSLVPEYKKAAKLLKGIAEIGAIDATV-HQKIPLKYSIKGYPTIKIF 103
>U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily
assigned gene nameprotein 320 protein.
Length = 440
Score = 42.3 bits (95), Expect = 5e-05
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 26 WFVMFYGASCVECQRLHGVWESVGASLRGRINVARIDANLAGLNTAKRFQVTKLPTFLFF 205
W V F+ C C+ L W++ + L+G++ + +DA + + A +F + PT +F
Sbjct: 185 WLVEFFAPWCGHCKSLEPQWKAAASELKGKVRLGALDATVHTV-VANKFAIRGFPTIKYF 243
Query: 206 RLG 214
G
Sbjct: 244 APG 246
Score = 27.9 bits (59), Expect = 1.0
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 26 WFVMFYGASCVECQRLHGVWESVGASLRGRINVARID 136
W V FY C C+ L ++ ++L+G V +D
Sbjct: 45 WIVEFYAPWCGHCKSLVPEYKKAASALKGVAKVGAVD 81
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 34.7 bits (76), Expect = 0.009
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = +2
Query: 26 WFVMFYGASCVECQRLHGVWESVGASLRGRINVARIDANLAGLNTAKRFQVTKLPTFLFF 205
WF+ FY C C +L W + G I V ++ + +V P+ +F+
Sbjct: 137 WFINFYSTYCSHCHQLAPTWRKFAREIEGTIRVGAVNC-AEDPQLCQSQRVNAYPSLVFY 195
Query: 206 RLG 214
G
Sbjct: 196 PTG 198
Score = 32.7 bits (71), Expect = 0.037
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 26 WFVMFYGASCVECQRLHGVWESVGASLRGRINVARIDAN 142
W V F+ C C + +++ + L G++N A+ID +
Sbjct: 690 WIVDFFAPWCGHCIQFAPIYDQIAKELAGKVNFAKIDCD 728
>Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical
protein C14B1.1 protein.
Length = 485
Score = 34.3 bits (75), Expect = 0.012
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +2
Query: 5 EGATTGDWFVM--FYGASCVECQRLHGVWESVGASLRGR---INVARIDANLAGLNTAKR 169
E G+ FV+ FY CV C+ L ++ L+ I +A++DA A +
Sbjct: 34 EETINGNEFVLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDAT-ENQALASK 92
Query: 170 FQVTKLPTFLFFRLG 214
F+V PT L+F+ G
Sbjct: 93 FEVRGYPTILYFKSG 107
Score = 32.7 bits (71), Expect = 0.037
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +2
Query: 29 FVMFYGASCVECQRLHGVWESVGASLRGRINV--ARIDANLAGLNTAKRFQVTKLPTFLF 202
FV FY C C++L VW+ + NV A++DA L L K V PT
Sbjct: 385 FVKFYAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATLNELADVK---VNSFPTLKL 441
Query: 203 FRLG 214
+ G
Sbjct: 442 WPAG 445
>U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulphide
isomerase isoformI protein.
Length = 485
Score = 34.3 bits (75), Expect = 0.012
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +2
Query: 5 EGATTGDWFVM--FYGASCVECQRLHGVWESVGASLRGR---INVARIDANLAGLNTAKR 169
E G+ FV+ FY CV C+ L ++ L+ I +A++DA A +
Sbjct: 34 EETINGNEFVLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDAT-ENQALASK 92
Query: 170 FQVTKLPTFLFFRLG 214
F+V PT L+F+ G
Sbjct: 93 FEVRGYPTILYFKSG 107
Score = 32.7 bits (71), Expect = 0.037
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +2
Query: 29 FVMFYGASCVECQRLHGVWESVGASLRGRINV--ARIDANLAGLNTAKRFQVTKLPTFLF 202
FV FY C C++L VW+ + NV A++DA L L K V PT
Sbjct: 385 FVKFYAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATLNELADVK---VNSFPTLKL 441
Query: 203 FRLG 214
+ G
Sbjct: 442 WPAG 445
>AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical
protein Y47H9C.5b protein.
Length = 318
Score = 32.7 bits (71), Expect = 0.037
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 26 WFVMFYGASCVECQRLHGVWESVGASLRGRINVARIDAN 142
W V F+ C C + +++ + L G++N A+ID +
Sbjct: 220 WIVDFFAPWCGHCIQFAPIYDQIAKELAGKVNFAKIDCD 258
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform b protein.
Length = 437
Score = 32.3 bits (70), Expect = 0.048
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 17 TGDWFVMFYGASCVECQRLHGVWESVGASLRG--RINVARIDANLAGLNTAKRFQVTKLP 190
T + V FY C C++L W+ +G I +A++D+ LN + ++ P
Sbjct: 325 TKNVLVEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDST---LNEVEDVKIQSFP 381
Query: 191 TFLFFRLG 214
T FF G
Sbjct: 382 TIKFFPAG 389
>U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform c protein.
Length = 371
Score = 32.3 bits (70), Expect = 0.048
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 17 TGDWFVMFYGASCVECQRLHGVWESVGASLRG--RINVARIDANLAGLNTAKRFQVTKLP 190
T + V FY C C++L W+ +G I +A++D+ LN + ++ P
Sbjct: 259 TKNVLVEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDST---LNEVEDVKIQSFP 315
Query: 191 TFLFFRLG 214
T FF G
Sbjct: 316 TIKFFPAG 323
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 32.3 bits (70), Expect = 0.048
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 17 TGDWFVMFYGASCVECQRLHGVWESVGASLRG--RINVARIDANLAGLNTAKRFQVTKLP 190
T + V FY C C++L W+ +G I +A++D+ LN + ++ P
Sbjct: 381 TKNVLVEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDST---LNEVEDVKIQSFP 437
Query: 191 TFLFFRLG 214
T FF G
Sbjct: 438 TIKFFPAG 445
>AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical
protein Y73B6BL.12 protein.
Length = 228
Score = 32.3 bits (70), Expect = 0.048
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 26 WFVMFYGASCVECQRLHGVWESVGASLRGRINVARIDAN 142
W V F+ C C + +++ + L G++N A+ID +
Sbjct: 130 WIVDFFAPWCGHCIQFAPIYDRIAKELAGKVNFAKIDCD 168
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 31.9 bits (69), Expect = 0.064
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 32 VMFYGAS-CVECQRLHGVWESVGASLRGRINVARIDANLAGLNTAKRFQVTKLPTFL 199
++F+ AS C CQ + E + A + R+++ +ID + + +++ +PTFL
Sbjct: 24 ILFFTASWCGPCQMIKPRVEELAAEHKDRLSILKIDVDECD-GVGEEYEINSMPTFL 79
>AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-like
protein DPY-11 protein.
Length = 246
Score = 30.7 bits (66), Expect = 0.15
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +2
Query: 20 GDWFVMFYGASCVECQRLHGVWESVGA-SLRGRINVARIDANLAGLNTAKRFQVTKLPTF 196
G+W + F+ C C+ L W + S I V +D + + RF VT LPT
Sbjct: 40 GEWMIEFHAPWCPACKDLQKAWNAFADWSDDLGIKVGEVDVTV-NPGLSGRFLVTALPTI 98
Query: 197 LFFRLG 214
+ G
Sbjct: 99 YHVKDG 104
>AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 11 protein.
Length = 246
Score = 30.7 bits (66), Expect = 0.15
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +2
Query: 20 GDWFVMFYGASCVECQRLHGVWESVGA-SLRGRINVARIDANLAGLNTAKRFQVTKLPTF 196
G+W + F+ C C+ L W + S I V +D + + RF VT LPT
Sbjct: 40 GEWMIEFHAPWCPACKDLQKAWNAFADWSDDLGIKVGEVDVTV-NPGLSGRFLVTALPTI 98
Query: 197 LFFRLG 214
+ G
Sbjct: 99 YHVKDG 104
>Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 28.7 bits (61), Expect = 0.59
Identities = 12/57 (21%), Positives = 30/57 (52%)
Frame = +2
Query: 38 FYGASCVECQRLHGVWESVGASLRGRINVARIDANLAGLNTAKRFQVTKLPTFLFFR 208
F+ C C+ + ++E A G +++ ++A + +R+ ++ +PTF+F +
Sbjct: 29 FFANWCGPCRMISPIFEQFSAEY-GNATFLKVNCDVAR-DIVQRYNISAMPTFIFLK 83
>AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 28.7 bits (61), Expect = 0.59
Identities = 12/57 (21%), Positives = 30/57 (52%)
Frame = +2
Query: 38 FYGASCVECQRLHGVWESVGASLRGRINVARIDANLAGLNTAKRFQVTKLPTFLFFR 208
F+ C C+ + ++E A G +++ ++A + +R+ ++ +PTF+F +
Sbjct: 29 FFANWCGPCRMISPIFEQFSAEY-GNATFLKVNCDVAR-DIVQRYNISAMPTFIFLK 83
>Z93383-14|CAB07631.2| 279|Caenorhabditis elegans Hypothetical
protein F54B8.12 protein.
Length = 279
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 104 LRGRINVARIDANLAGLNTAKRFQVTKLPTF 196
L G I + I A +A L T KRF T PTF
Sbjct: 85 LEGSITMGIIRATIAFLITLKRFIATFFPTF 115
>U40028-10|AAA81121.3| 363|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 40 protein.
Length = 363
Score = 27.5 bits (58), Expect = 1.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 9 VQLLEIGLLCFMERLVLNVRDCM 77
+ +L + +LCFM ++L +R CM
Sbjct: 30 ILMLTVEMLCFMLGIILTIRGCM 52
>AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin
reuptake transporter protein.
Length = 671
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 115 TASQTCPYTFPDSMQSLTFNTRRSIKHNKPISS 17
TAS+ P + D +LT +T SI N+PI++
Sbjct: 45 TASEYMPLSVADKPLTLTVSTSHSIDPNEPIAA 77
>AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 5 protein.
Length = 671
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 115 TASQTCPYTFPDSMQSLTFNTRRSIKHNKPISS 17
TAS+ P + D +LT +T SI N+PI++
Sbjct: 45 TASEYMPLSVADKPLTLTVSTSHSIDPNEPIAA 77
>Z81555-6|CAJ85762.1| 709|Caenorhabditis elegans Hypothetical
protein F58E10.1b protein.
Length = 709
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 37 VLWSVLC*MSEIAWSLGKCRGKSERP 114
+LW++LC +S ++ + RG SE P
Sbjct: 648 ILWNILCRISGVSIEIIDARGLSEHP 673
>Z81555-5|CAB04517.2| 694|Caenorhabditis elegans Hypothetical
protein F58E10.1a protein.
Length = 694
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 37 VLWSVLC*MSEIAWSLGKCRGKSERP 114
+LW++LC +S ++ + RG SE P
Sbjct: 633 ILWNILCRISGVSIEIIDARGLSEHP 658
>Z66564-1|CAA91471.1| 329|Caenorhabditis elegans Hypothetical
protein F52D10.2 protein.
Length = 329
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 149 QQGLHQFWQHLYGLSDLPLHFPRL 78
QQGL ++W H S P +P++
Sbjct: 90 QQGLTEYWAHRITFSSAPPEYPKV 113
>Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical
protein ZK455.8a protein.
Length = 757
Score = 25.8 bits (54), Expect = 4.2
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = +1
Query: 7 GCNYWRLVCYVLWSV 51
GC+YW+++ Y++ SV
Sbjct: 165 GCSYWQIIVYLIISV 179
>Z99710-6|CAB16869.1| 362|Caenorhabditis elegans Hypothetical
protein F08A8.6 protein.
Length = 362
Score = 25.4 bits (53), Expect = 5.5
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -3
Query: 179 LLETS*QYLNQQGLHQFWQHLYGLSDLPLHFPRLHAISDIQ 57
+ E + Q+ + HQ+++ + PLH P SD++
Sbjct: 234 IFEKTKQFYEECSKHQYFRCFVQIPTFPLHAPNFFTQSDLE 274
>Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical
protein Y57G11C.10b protein.
Length = 459
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 155 LNQQGLHQFWQHLYGLSDLPLHFPRLHAI 69
L + G + LYGL +LP F RL AI
Sbjct: 217 LARYGKSPYLYPLYGLGELPQGFARLSAI 245
>Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical
protein Y57G11C.10a protein.
Length = 444
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 155 LNQQGLHQFWQHLYGLSDLPLHFPRLHAI 69
L + G + LYGL +LP F RL AI
Sbjct: 217 LARYGKSPYLYPLYGLGELPQGFARLSAI 245
>Z77135-2|CAB00879.1| 769|Caenorhabditis elegans Hypothetical
protein T16A9.4 protein.
Length = 769
Score = 25.4 bits (53), Expect = 5.5
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -3
Query: 116 YGLS-DLPLHFPRLHAISDIQHKTLHKT*QTNLQ 18
YGL+ +LP + P H ISD+Q + L+K ++ LQ
Sbjct: 120 YGLNKNLPANKPLRHTISDVQSR-LNKQVKSMLQ 152
>Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical
protein K09C8.4 protein.
Length = 633
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 131 FWQHLYGLSDLPLHFPRLHAISDIQHKT 48
F QH + HF RLH I+D H++
Sbjct: 45 FMQHFKSVLKYSDHFFRLHLITDENHRS 72
>U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein.
Length = 444
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 155 LNQQGLHQFWQHLYGLSDLPLHFPRLHAI 69
L + G + LYGL +LP F RL AI
Sbjct: 217 LARYGKSPYLYPLYGLGELPQGFARLSAI 245
>Z81130-5|CAB03420.1| 361|Caenorhabditis elegans Hypothetical
protein T23G11.7a protein.
Length = 361
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 16 YWRLVCYVLWSVLC*MSEIAWSL 84
YW L+C L V EI+W L
Sbjct: 31 YWSLLCMALGPVETTFDEISWKL 53
>U53338-3|AAA96191.1| 534|Caenorhabditis elegans Ammonium
transporter homolog protein1 protein.
Length = 534
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 43 WSVLC*MSEIAWSLG 87
W ++C ++ IAWSLG
Sbjct: 398 WQMICALAIIAWSLG 412
>AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical
protein Y113G7B.15 protein.
Length = 328
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 116 INVARIDANLAGLNTAKRFQVTKLPTFLFFRLG 214
+NV R D + A + + + +PT ++FR+G
Sbjct: 216 LNVYRFDQDYAEEDIMENLYLNHIPTAVYFRVG 248
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 62 CQRLHGVWESVGASLRGRINVARIDANL 145
C HG + +V A RGR+++ +D +
Sbjct: 303 CDPRHGRYLTVAAMFRGRMSMREVDEQM 330
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 62 CQRLHGVWESVGASLRGRINVARIDANL 145
C HG + +V A RGR+++ +D +
Sbjct: 303 CDPRHGRYLTVAAMFRGRMSMKEVDEQM 330
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 62 CQRLHGVWESVGASLRGRINVARIDANL 145
C HG + +V A RGR+++ +D +
Sbjct: 303 CDPRHGRYLTVAAMFRGRMSMREVDEQM 330
>AF022973-3|AAC25799.1| 551|Caenorhabditis elegans Asparaginyl trna
synthetase protein2 protein.
Length = 551
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = -1
Query: 148 SKVCINSGNIYTASQT---CPYTFPDSMQSLTFNTRRSIKHNKPISSSC 11
S VC +G IY CP+T + IKHNK + +C
Sbjct: 67 SVVC--NGEIYNHQSLKIDCPFTLKNGGSDCAAIITSFIKHNKDLKEAC 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,014,954
Number of Sequences: 27780
Number of extensions: 86525
Number of successful extensions: 249
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 12,740,198
effective HSP length: 50
effective length of database: 11,351,198
effective search space used: 227023960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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