Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_K19
         (214 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1643|AAF48063.1|  544|Drosophila melanogaster CG11695-P...    29   0.88 
AE013599-129|AAF57296.3|  499|Drosophila melanogaster CG14471-PA...    29   0.88 
AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB...    29   0.88 

>AE014298-1643|AAF48063.1|  544|Drosophila melanogaster CG11695-PA
           protein.
          Length = 544

 Score = 29.1 bits (62), Expect = 0.88
 Identities = 20/51 (39%), Positives = 24/51 (47%)
 Frame = -1

Query: 184 RLQQRRTETKALV*PTCWSVVLKKKLRQNYEFLIHSKCIIEERSSLLCVGC 32
           RL  RRT   A V   C S   K K +QN   L+H + +  E S L  V C
Sbjct: 341 RLHMRRTHDPAFVPFICDSCGAKFKTKQN--LLVHKRTVHREGSQLPEVQC 389


>AE013599-129|AAF57296.3|  499|Drosophila melanogaster CG14471-PA,
           isoform A protein.
          Length = 499

 Score = 29.1 bits (62), Expect = 0.88
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 97  YEFLIHSKCIIEERSSLLCVG 35
           YEFL  +KC+ E+R+ L C G
Sbjct: 171 YEFLCCAKCMNEQRTGLTCAG 191


>AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB,
           isoform B protein.
          Length = 1209

 Score = 29.1 bits (62), Expect = 0.88
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 97  YEFLIHSKCIIEERSSLLCVG 35
           YEFL  +KC+ E+R+ L C G
Sbjct: 171 YEFLCCAKCMNEQRTGLTCAG 191


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,253,494
Number of Sequences: 53049
Number of extensions: 116329
Number of successful extensions: 375
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 24,988,368
effective HSP length: 50
effective length of database: 22,335,918
effective search space used: 446718360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)