Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_K18
         (144 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   1.7  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            21   4.0  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    21   6.9  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 77   AIKLSTKTLSKRLVPNSARGGTRP 6
            A++ + KTL   ++PNSA+   +P
Sbjct: 1108 AVEPAKKTLVATILPNSAKPAQQP 1131


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +3

Query: 9   PRAASCRIRHEAFAQCFC*QFYS 77
           P    C+     FA C C  FY+
Sbjct: 729 PNQFLCKYDTHCFALCHCCDFYA 751


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -1

Query: 99  RQFFYLQRYKIVNKNIEQTPRA 34
           RQF  ++   ++N+++ QTP++
Sbjct: 286 RQFGSIKPTPMLNRSMSQTPKS 307


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,741
Number of Sequences: 2352
Number of extensions: 1527
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 27
effective length of database: 500,475
effective search space used: 10009500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)