Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_K16
(284 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00033-6|AAC48295.2| 104|Caenorhabditis elegans Ribosomal prote... 69 5e-13
AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical ... 30 0.31
AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 30 0.31
Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical pr... 29 0.41
Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical pr... 29 0.41
AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein. 29 0.41
AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein. 29 0.41
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical... 29 0.71
Z81117-12|CAB03320.2| 345|Caenorhabditis elegans Hypothetical p... 27 2.9
Z70680-8|CAA94570.2| 349|Caenorhabditis elegans Hypothetical pr... 27 2.9
AF125959-1|AAD14733.1| 475|Caenorhabditis elegans Hypothetical ... 26 3.8
AY204187-1|AAO39191.1| 156|Caenorhabditis elegans nuclear recep... 26 5.0
AF016438-9|AAB65891.2| 394|Caenorhabditis elegans Nuclear hormo... 26 5.0
Z81589-9|CAJ85769.1| 926|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z81589-8|CAB04720.1| 923|Caenorhabditis elegans Hypothetical pr... 25 6.6
AC006834-4|AAF40012.1| 392|Caenorhabditis elegans Hypothetical ... 25 6.6
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 25 6.6
Z92806-6|CAE17878.1| 268|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z82085-8|CAB04990.1| 270|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z81529-11|CAB04297.1| 249|Caenorhabditis elegans Hypothetical p... 25 8.7
Z81529-8|CAB04291.1| 249|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical pr... 25 8.7
U97009-12|ABR92602.1| 532|Caenorhabditis elegans Udp-glucuronos... 25 8.7
U97009-11|AAC69026.1| 533|Caenorhabditis elegans Udp-glucuronos... 25 8.7
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 25 8.7
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 25 8.7
AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical... 25 8.7
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 25 8.7
>U00033-6|AAC48295.2| 104|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 36 protein.
Length = 104
Score = 68.9 bits (161), Expect = 5e-13
Identities = 35/75 (46%), Positives = 50/75 (66%)
Frame = +1
Query: 58 IAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGRAQYEKR 237
+A+GL KGH T++ +K R R KG+ +K +K VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 238 AMELLKVSKDKRALK 282
+E+L++SKDKRALK
Sbjct: 59 VLEMLRISKDKRALK 73
>AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical
protein H06I04.3c protein.
Length = 786
Score = 29.9 bits (64), Expect = 0.31
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +1
Query: 73 RKGHKTTKISAGKKGITDKAIKIRPARLKGI----QTKHSKFVRDLVREVVGRAQYEKRA 240
R K + A K+ + ++ + +GI Q +HS+ VR++ + + EK+
Sbjct: 701 RPSKKVAEAKARKQKKMQRKLESAKKKAEGILENDQMEHSEKVREMKKVYANATRKEKKK 760
Query: 241 MELLKVSKDKR 273
+EL++++K K+
Sbjct: 761 VELVRMTKGKK 771
>AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical
protein H06I04.3a protein.
Length = 833
Score = 29.9 bits (64), Expect = 0.31
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +1
Query: 73 RKGHKTTKISAGKKGITDKAIKIRPARLKGI----QTKHSKFVRDLVREVVGRAQYEKRA 240
R K + A K+ + ++ + +GI Q +HS+ VR++ + + EK+
Sbjct: 701 RPSKKVAEAKARKQKKMQRKLESAKKKAEGILENDQMEHSEKVREMKKVYANATRKEKKK 760
Query: 241 MELLKVSKDKR 273
+EL++++K K+
Sbjct: 761 VELVRMTKGKK 771
>Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical
protein C34B4.1b protein.
Length = 1099
Score = 29.5 bits (63), Expect = 0.41
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 164 MPFSLAGLILMALSVIPFLPADIFVVLWPFRRPIA 60
MPF L G L+AL++ FLP + +LW +R I+
Sbjct: 691 MPFGLQGWKLLALTIPLFLPKQ-YSLLWLLKRHIS 724
>Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical
protein C34B4.1a protein.
Length = 995
Score = 29.5 bits (63), Expect = 0.41
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 164 MPFSLAGLILMALSVIPFLPADIFVVLWPFRRPIA 60
MPF L G L+AL++ FLP + +LW +R I+
Sbjct: 587 MPFGLQGWKLLALTIPLFLPKQ-YSLLWLLKRHIS 620
>AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein.
Length = 1045
Score = 29.5 bits (63), Expect = 0.41
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 164 MPFSLAGLILMALSVIPFLPADIFVVLWPFRRPIA 60
MPF L G L+AL++ FLP + +LW +R I+
Sbjct: 637 MPFGLQGWKLLALTIPLFLPKQ-YSLLWLLKRHIS 670
>AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein.
Length = 1099
Score = 29.5 bits (63), Expect = 0.41
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 164 MPFSLAGLILMALSVIPFLPADIFVVLWPFRRPIA 60
MPF L G L+AL++ FLP + +LW +R I+
Sbjct: 691 MPFGLQGWKLLALTIPLFLPKQ-YSLLWLLKRHIS 724
>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1205
Score = 28.7 bits (61), Expect = 0.71
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 139 IRPARLKGIQTKHSKFVRDLVREVVGRAQYEKRAMELLKVSKDKR 273
++ ++ + T + L+REV G Y++R E LK+ K+ +
Sbjct: 140 VKQGKINELATSPDAYKLKLLREVAGTRVYDERKEESLKILKETK 184
>Z81117-12|CAB03320.2| 345|Caenorhabditis elegans Hypothetical
protein T06E6.5 protein.
Length = 345
Score = 26.6 bits (56), Expect = 2.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 186 KLRVFGLNAL*PSWPNFNGFVCNTLFASGYLCRFVAFSQ 70
KL V GL +L W + + N F + +C FV FS+
Sbjct: 198 KLDVTGLTSL-TQWRKAHTVIMNDFFITADICDFVNFSE 235
>Z70680-8|CAA94570.2| 349|Caenorhabditis elegans Hypothetical
protein C25G4.7 protein.
Length = 349
Score = 26.6 bits (56), Expect = 2.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 187 VRDLVREVVGRAQYEKRAMELLKV 258
+RD + EV+G Q++K +E+L V
Sbjct: 133 IRDFLCEVIGNRQFKKYKLEILTV 156
>AF125959-1|AAD14733.1| 475|Caenorhabditis elegans Hypothetical
protein H23N18.4 protein.
Length = 475
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 196 LVREVVGRAQYEKRAMELLKV 258
+V+++V +YEK A ELL+V
Sbjct: 434 IVKDMVSNPKYEKNAQELLRV 454
>AY204187-1|AAO39191.1| 156|Caenorhabditis elegans nuclear receptor
NHR-103 protein.
Length = 156
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 109 CQRISLSFC-GLFADQLRFQIGRAMISDCLVPNS 11
C++ L C + D +FQ R +IS C VP S
Sbjct: 63 CKQCRLKKCVEVGMDSKKFQTNRDLISSCSVPQS 96
>AF016438-9|AAB65891.2| 394|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 103 protein.
Length = 394
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 109 CQRISLSFC-GLFADQLRFQIGRAMISDCLVPNS 11
C++ L C + D +FQ R +IS C VP S
Sbjct: 63 CKQCRLKKCVEVGMDSKKFQTNRDLISSCSVPQS 96
>Z81589-9|CAJ85769.1| 926|Caenorhabditis elegans Hypothetical
protein T08G5.5b protein.
Length = 926
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1
Query: 142 RPARLKGIQTKHSKFVRDLVREVVGRAQYEKRAMELLKVSKDKRAL 279
R LK ++ HS + ++ ++ A YE+RA+ L ++ + ++AL
Sbjct: 679 RKRLLKFLEVSHSYSPQTVLLQLAPHAFYEERALILGRLKQHEQAL 724
>Z81589-8|CAB04720.1| 923|Caenorhabditis elegans Hypothetical
protein T08G5.5a protein.
Length = 923
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1
Query: 142 RPARLKGIQTKHSKFVRDLVREVVGRAQYEKRAMELLKVSKDKRAL 279
R LK ++ HS + ++ ++ A YE+RA+ L ++ + ++AL
Sbjct: 676 RKRLLKFLEVSHSYSPQTVLLQLAPHAFYEERALILGRLKQHEQAL 721
>AC006834-4|AAF40012.1| 392|Caenorhabditis elegans Hypothetical
protein ZK973.8 protein.
Length = 392
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 160 GIQTKHSKFVRDLVREVVGRAQYEKRAMELLKV 258
G T S VRD + V+G +YE E+L V
Sbjct: 126 GYSTPASGAVRDFLVGVIGNRRYENCMFEILTV 158
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 112 KGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGRAQYEKRAMEL 249
+ + D + P+ + ++ + +KFV DL + + EKRA EL
Sbjct: 3142 EAVNDVPASVEPSAV-ALRDRAAKFVSDLEKNIQKTGDDEKRADEL 3186
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 112 KGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGRAQYEKRAMEL 249
+ + D + P+ + ++ + +KFV DL + + EKRA EL
Sbjct: 4045 EAVNDVPASVEPSAV-ALRDRAAKFVSDLEKNIQKTGDDEKRADEL 4089
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 112 KGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGRAQYEKRAMEL 249
+ + D + P+ + ++ + +KFV DL + + EKRA EL
Sbjct: 4999 EAVNDVPASVEPSAV-ALRDRAAKFVSDLEKNIQKTGDDEKRADEL 5043
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 112 KGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGRAQYEKRAMEL 249
+ + D + P+ + ++ + +KFV DL + + EKRA EL
Sbjct: 5902 EAVNDVPASVEPSAV-ALRDRAAKFVSDLEKNIQKTGDDEKRADEL 5946
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 112 KGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGRAQYEKRAMEL 249
+ + D + P+ + ++ + +KFV DL + + EKRA EL
Sbjct: 6805 EAVNDVPASVEPSAV-ALRDRAAKFVSDLEKNIQKTGDDEKRADEL 6849
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 112 KGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGRAQYEKRAMEL 249
+ + D + P+ + ++ + +KFV DL + + EKRA EL
Sbjct: 7708 EAVNDVPASVEPSAV-ALRDRAAKFVSDLEKNIQKTGDDEKRADEL 7752
>Z92806-6|CAE17878.1| 268|Caenorhabditis elegans Hypothetical
protein K10G4.9 protein.
Length = 268
Score = 25.0 bits (52), Expect = 8.7
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = -1
Query: 266 SFDTLSNSIALFSYCARPTTSRTKSR----TNLECLV*MPFSLAGLILMALSVIPF 111
SF L+ I+++ Y RT R + CL + L ++L+ LS+IPF
Sbjct: 121 SFTRLTEKISVW-YAVAIAVIRTLMRYPVNVRINCLTQSTYGLRIVLLITLSIIPF 175
>Z82085-8|CAB04990.1| 270|Caenorhabditis elegans Hypothetical
protein ZK218.11 protein.
Length = 270
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 168 LNAL*PSWPNFNGFVCNTLFASGYLCRFVAFSQTNCD 58
+NA + P GF C + S Y C V F + NCD
Sbjct: 112 VNAAVSTCPKTCGFCCQS---SDYNCPNVRFPRLNCD 145
>Z81529-11|CAB04297.1| 249|Caenorhabditis elegans Hypothetical
protein F35E8.13 protein.
Length = 249
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 165 NAL*PSWPNFNGFVCNTLFASGYLCRFVAFSQTNC 61
NA + P G C T SGY C VA+ + NC
Sbjct: 95 NAAQSTCPRTCGLCCQT---SGYNCPNVAYPRLNC 126
>Z81529-8|CAB04291.1| 249|Caenorhabditis elegans Hypothetical
protein F35E8.10 protein.
Length = 249
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 165 NAL*PSWPNFNGFVCNTLFASGYLCRFVAFSQTNC 61
NA + P G C T SGY C VA+ + NC
Sbjct: 95 NAAQSTCPRTCGLCCQT---SGYNCPNVAYPRLNC 126
>Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical
protein ZK938.3 protein.
Length = 660
Score = 25.0 bits (52), Expect = 8.7
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -1
Query: 284 NLRARLSFDTLSNSIALFSYCARPTTSRTKSRTNLECLV*MPFSLAGLILMALSVIP 114
N R L F+ N I+ + R S S+TNL+CL+ L+ L + IP
Sbjct: 115 NARKDLIFEIYLNLISFYKTSDR-MVSIEGSQTNLKCLLVSAKMLSSFFLDVFTKIP 170
>U97009-12|ABR92602.1| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform b protein.
Length = 532
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 199 VREVVGRAQYEKRAMELLKV 258
VR++V ++YE A ELLKV
Sbjct: 434 VRDMVTNSKYEVNAQELLKV 453
>U97009-11|AAC69026.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform a protein.
Length = 533
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 199 VREVVGRAQYEKRAMELLKV 258
VR++V ++YE A ELLKV
Sbjct: 435 VRDMVTNSKYEVNAQELLKV 454
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 172 KHSKFVRDLVREVVGRAQYEKRAMELLKVSKDK 270
K +F+ + + EVV R YEKR + K K
Sbjct: 691 KKGRFIIEYIGEVVERDDYEKRKTKYAADKKHK 723
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 172 KHSKFVRDLVREVVGRAQYEKRAMELLKVSKDK 270
K +F+ + + EVV R YEKR + K K
Sbjct: 705 KKGRFIIEYIGEVVERDDYEKRKTKYAADKKHK 737
>AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical
protein C50H11.1 protein.
Length = 517
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 282 LKGALIFRYFEQFHRPLLILCAPNNFTNQIADKLRVF 172
LK A +F F+ LL A NNF + +K+R+F
Sbjct: 262 LKNATVFMGVPTFYSRLL---ATNNFNKESFEKIRLF 295
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 25.0 bits (52), Expect = 8.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 252 EQFHRPLLILCAPNNF 205
++FHRP ++LC P F
Sbjct: 191 DKFHRPFILLCFPPVF 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,653,413
Number of Sequences: 27780
Number of extensions: 120897
Number of successful extensions: 357
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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