Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_K14
         (304 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   152   3e-39
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     23   2.5  
EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.     22   4.4  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    21   7.8  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  152 bits (368), Expect = 3e-39
 Identities = 72/94 (76%), Positives = 77/94 (81%)
 Frame = +3

Query: 21  MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 200
           MGRVRT             YYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+R
Sbjct: 1   MGRVRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKR 60

Query: 201 LIHSQVRGISVKLQEEERERRDNYVPEVSGLEQD 302
           L HSQVRGIS+KLQEEERERRDNYVP+VS LEQD
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPDVSALEQD 94


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 222 GISVKLQEEERERRDNYVPEVSGLE 296
           G + +L+EEE + +  + PE+ G E
Sbjct: 87  GTTCELEEEEVDLQAKHAPEMDGSE 111


>EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 65  NLRRFFYGLSPN 30
           N ++FFY L+PN
Sbjct: 129 NFKKFFYTLNPN 140


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = +3

Query: 216 VRGISV--KLQEEERERRDNYVPEV 284
           +R +S+  KLQ   ++RRD YV  V
Sbjct: 168 IRSLSICAKLQRIPKDRRDLYVQGV 192


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 300,264
Number of Sequences: 2352
Number of extensions: 5805
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19557855
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)