Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_K14
         (304 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22142-1|AAA28869.1|  131|Drosophila melanogaster protein ( D.me...   149   9e-37
BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p pro...   149   9e-37
AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal pr...   149   9e-37
AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB...   149   9e-37
AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-P...    29   1.5  
AY071228-1|AAL48850.1|  326|Drosophila melanogaster RE26822p pro...    27   6.0  
AE014297-2781|AAG22161.1|  355|Drosophila melanogaster CG5085-PA...    27   6.0  
AY069558-1|AAL39703.1| 1742|Drosophila melanogaster LD28902p pro...    26   8.0  
AF217651-1|AAF35307.1| 1407|Drosophila melanogaster c11.1 protein.     26   8.0  
AE014298-1324|AAF46485.2| 1742|Drosophila melanogaster CG12132-P...    26   8.0  

>M22142-1|AAA28869.1|  131|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S17 gene, complete cds.
           ).
          Length = 131

 Score =  149 bits (360), Expect = 9e-37
 Identities = 72/94 (76%), Positives = 75/94 (79%)
 Frame = +3

Query: 21  MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 200
           MGRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 201 LIHSQVRGISVKLQEEERERRDNYVPEVSGLEQD 302
           L HSQVRGIS+KLQEEERERRDNYVP VS LEQD
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPAVSALEQD 94


>BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p
           protein.
          Length = 131

 Score =  149 bits (360), Expect = 9e-37
 Identities = 72/94 (76%), Positives = 75/94 (79%)
 Frame = +3

Query: 21  MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 200
           MGRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 201 LIHSQVRGISVKLQEEERERRDNYVPEVSGLEQD 302
           L HSQVRGIS+KLQEEERERRDNYVP VS LEQD
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPAVSALEQD 94


>AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal
           protein S17 protein.
          Length = 131

 Score =  149 bits (360), Expect = 9e-37
 Identities = 72/94 (76%), Positives = 75/94 (79%)
 Frame = +3

Query: 21  MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 200
           MGRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 201 LIHSQVRGISVKLQEEERERRDNYVPEVSGLEQD 302
           L HSQVRGIS+KLQEEERERRDNYVP VS LEQD
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPAVSALEQD 94


>AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB
           protein.
          Length = 131

 Score =  149 bits (360), Expect = 9e-37
 Identities = 72/94 (76%), Positives = 75/94 (79%)
 Frame = +3

Query: 21  MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 200
           MGRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 201 LIHSQVRGISVKLQEEERERRDNYVPEVSGLEQD 302
           L HSQVRGIS+KLQEEERERRDNYVP VS LEQD
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPAVSALEQD 94


>AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-PB,
           isoform B protein.
          Length = 1109

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 287 RYFWDIIVTPFTLLFLKLNRDSSHLGVYETSHQMGGE 177
           RY   ++ TP +L FL L+ D+ HL  Y +   + GE
Sbjct: 17  RYLTLLMNTPLSLSFLCLSADAQHLIAYISQRGLHGE 53


>AY071228-1|AAL48850.1|  326|Drosophila melanogaster RE26822p
           protein.
          Length = 326

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 92  KPSVVFFDYNLRRFFYGLSPNTTHDC 15
           KP +VFF  NL + FY        DC
Sbjct: 229 KPDIVFFGENLPKRFYSSPEEDFQDC 254


>AE014297-2781|AAG22161.1|  355|Drosophila melanogaster CG5085-PA
           protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 92  KPSVVFFDYNLRRFFYGLSPNTTHDC 15
           KP +VFF  NL + FY        DC
Sbjct: 198 KPDIVFFGENLPKRFYSSPEEDFQDC 223


>AY069558-1|AAL39703.1| 1742|Drosophila melanogaster LD28902p
           protein.
          Length = 1742

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = -3

Query: 248 LFLKLNRDSS-----HLGVYETSHQMGGEPSNFVAKRLSRNDSNFLTYP 117
           L L++NR+S+     H  V ET+  +GG   NF  +  S+       YP
Sbjct: 642 LLLQINRESAYRQLLHDFVLETNEFLGGLDENFAQRLASKLADQMYLYP 690


>AF217651-1|AAF35307.1| 1407|Drosophila melanogaster c11.1 protein.
          Length = 1407

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = -3

Query: 248 LFLKLNRDSS-----HLGVYETSHQMGGEPSNFVAKRLSRNDSNFLTYP 117
           L L++NR+S+     H  V ET+  +GG   NF  +  S+       YP
Sbjct: 642 LLLQINRESAYRQLLHDFVLETNEFLGGLDENFAQRLASKLADQMYLYP 690


>AE014298-1324|AAF46485.2| 1742|Drosophila melanogaster CG12132-PA
           protein.
          Length = 1742

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = -3

Query: 248 LFLKLNRDSS-----HLGVYETSHQMGGEPSNFVAKRLSRNDSNFLTYP 117
           L L++NR+S+     H  V ET+  +GG   NF  +  S+       YP
Sbjct: 642 LLLQINRESAYRQLLHDFVLETNEFLGGLDENFAQRLASKLADQMYLYP 690


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,048,848
Number of Sequences: 53049
Number of extensions: 230376
Number of successful extensions: 694
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)