Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_K13
         (175 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   3.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   3.2  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          19   4.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    19   5.5  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    19   7.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              18   9.6  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          18   9.6  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          18   9.6  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          18   9.6  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          18   9.6  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          18   9.6  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    18   9.6  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    18   9.6  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    18   9.6  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 152 FIGFTMY 172
           FIGFTMY
Sbjct: 707 FIGFTMY 713



 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = -1

Query: 154 EHGNQYYTREEHQISGNISSCWIIVISAEDQGF 56
           E+G + +TRE  + +  I++   +  +A+D+ F
Sbjct: 152 EYGIEVFTREATERNVCIAAAVKVPSAADDRMF 184



 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 166 CETYEHGNQYYT 131
           CE YE+ +  YT
Sbjct: 473 CEEYEYVHDEYT 484


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 152 FIGFTMY 172
           FIGFTMY
Sbjct: 797 FIGFTMY 803



 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = -1

Query: 154 EHGNQYYTREEHQISGNISSCWIIVISAEDQGF 56
           E+G + +TRE  + +  I++   +  +A+D+ F
Sbjct: 242 EYGIEVFTREATERNVCIAAAVKVPSAADDRMF 274


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 52  RYEGVSKDDKHHYRS 8
           RYE +  +D++ YR+
Sbjct: 233 RYEDLRHEDRNSYRN 247


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl
          cyclase beta-3 protein.
          Length = 832

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -3

Query: 95 LLDNSNIRRRPRLHKIRGRK*RRQASLQEP 6
          +L+N +   R    + R  + RRQAS+++P
Sbjct: 5  ILENMSEYIRQVYGEDRWEEIRRQASVEQP 34


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 146 EPVLYPRRASNIRQH 102
           EPV  PRR +N   H
Sbjct: 336 EPVEPPRRKNNCPLH 350


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 63   WSSADITIIQQLDMLPDI*CSSR 131
            W +A I+   Q   L ++ C SR
Sbjct: 1410 WDTAQISSTVQKYTLENLLCGSR 1432


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 52  RYEGVSKDDKHHYRS 8
           RYE    +D++ YR+
Sbjct: 233 RYEDSRHEDRNSYRN 247


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 52  RYEGVSKDDKHHYRS 8
           RYE    +D++ YR+
Sbjct: 233 RYEDSRHEDRNSYRN 247


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 52  RYEGVSKDDKHHYRS 8
           RYE    +D++ YR+
Sbjct: 233 RYEDSRHEDRNSYRN 247


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 52  RYEGVSKDDKHHYRS 8
           RYE    +D++ YR+
Sbjct: 233 RYEDSRHEDRNSYRN 247


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 52  RYEGVSKDDKHHYRS 8
           RYE    +D++ YR+
Sbjct: 233 RYEDSRHEDRNSYRN 247


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 52  RYEGVSKDDKHHYRS 8
           RYE    +D++ YR+
Sbjct: 233 RYEDSRHEDRNSYRN 247


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = -3

Query: 146 EPVLYPRRASNIRQH 102
           +P ++PR+    +QH
Sbjct: 218 QPGMHPRQQQQAQQH 232


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 159 PMNTGTSIIPAKSIKYP 109
           P N GT++  +  IK P
Sbjct: 271 PTNLGTTVRASVHIKLP 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,808
Number of Sequences: 438
Number of extensions: 879
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 37
effective length of database: 130,137
effective search space used:  2602740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)