Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_K12
         (188 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          21   3.9  
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    21   5.2  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    20   9.0  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    20   9.0  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 95  TDRQSSKRGRKD 130
           T R+S+KRG+KD
Sbjct: 526 TRRKSTKRGKKD 537


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 101 RQSSKRGRKDLVRHQS 148
           ++SSKR R+   RHQ+
Sbjct: 3   KESSKRTRQSYSRHQT 18


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -3

Query: 81  SHFKLFH*DTRHVNHAVTRPSCRIP 7
           SH ++ H D  +       P+C++P
Sbjct: 568 SHLRIKHADRLNAPKFSNPPNCKLP 592


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -3

Query: 81  SHFKLFH*DTRHVNHAVTRPSCRIP 7
           SH ++ H D  +       P+C++P
Sbjct: 544 SHLRIKHADRLNAPKFSNPPNCKLP 568


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,177
Number of Sequences: 2352
Number of extensions: 2848
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 41
effective length of database: 467,547
effective search space used:  9818487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)