Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_K11
         (177 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ356012-1|ABC86955.1|  818|Homo sapiens ZNF438 transcript varia...    28   6.2  
DQ356011-1|ABC86954.1|  818|Homo sapiens ZNF438 transcript varia...    28   6.2  
BC104757-1|AAI04758.1|  828|Homo sapiens zinc finger protein 438...    28   6.2  
BC101622-1|AAI01623.1|  828|Homo sapiens ZNF438 transcript varia...    28   6.2  
AL359532-3|CAM17193.1|  828|Homo sapiens zinc finger protein 438...    28   6.2  
AL359532-2|CAI13438.1|  818|Homo sapiens zinc finger protein 438...    28   6.2  
AL359532-1|CAI13437.1|  392|Homo sapiens zinc finger protein 438...    28   6.2  
AK131357-1|BAD18510.1|  779|Homo sapiens protein ( Homo sapiens ...    28   6.2  
AF440405-1|AAP97319.1|  392|Homo sapiens unknown protein.              28   6.2  
AF428258-1|AAP97298.1|  828|Homo sapiens hypothetical protein pr...    28   6.2  

>DQ356012-1|ABC86955.1|  818|Homo sapiens ZNF438 transcript variant
           3 protein.
          Length = 818

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 163 CQLALAQNNRFVTHWLETHNCENKSK 86
           C   L +    + HW   HNCE+ SK
Sbjct: 771 CAEMLGRKEDLLHHWKHQHNCEDPSK 796


>DQ356011-1|ABC86954.1|  818|Homo sapiens ZNF438 transcript variant
           2 protein.
          Length = 818

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 163 CQLALAQNNRFVTHWLETHNCENKSK 86
           C   L +    + HW   HNCE+ SK
Sbjct: 771 CAEMLGRKEDLLHHWKHQHNCEDPSK 796


>BC104757-1|AAI04758.1|  828|Homo sapiens zinc finger protein 438
           protein.
          Length = 828

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 163 CQLALAQNNRFVTHWLETHNCENKSK 86
           C   L +    + HW   HNCE+ SK
Sbjct: 781 CAEMLGRKEDLLHHWKHQHNCEDPSK 806


>BC101622-1|AAI01623.1|  828|Homo sapiens ZNF438 transcript variant
           3 protein.
          Length = 828

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 163 CQLALAQNNRFVTHWLETHNCENKSK 86
           C   L +    + HW   HNCE+ SK
Sbjct: 781 CAEMLGRKEDLLHHWKHQHNCEDPSK 806


>AL359532-3|CAM17193.1|  828|Homo sapiens zinc finger protein 438
           protein.
          Length = 828

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 163 CQLALAQNNRFVTHWLETHNCENKSK 86
           C   L +    + HW   HNCE+ SK
Sbjct: 781 CAEMLGRKEDLLHHWKHQHNCEDPSK 806


>AL359532-2|CAI13438.1|  818|Homo sapiens zinc finger protein 438
           protein.
          Length = 818

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 163 CQLALAQNNRFVTHWLETHNCENKSK 86
           C   L +    + HW   HNCE+ SK
Sbjct: 771 CAEMLGRKEDLLHHWKHQHNCEDPSK 796


>AL359532-1|CAI13437.1|  392|Homo sapiens zinc finger protein 438
           protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 163 CQLALAQNNRFVTHWLETHNCENKSK 86
           C   L +    + HW   HNCE+ SK
Sbjct: 345 CAEMLGRKEDLLHHWKHQHNCEDPSK 370


>AK131357-1|BAD18510.1|  779|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16387 fis, clone TRACH2007483, weakly  similar
           to GASTRULA ZINC FINGER PROTEIN XLCGF7.1. ).
          Length = 779

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 163 CQLALAQNNRFVTHWLETHNCENKSK 86
           C   L +    + HW   HNCE+ SK
Sbjct: 732 CAEMLGRKEDLLHHWKHQHNCEDPSK 757


>AF440405-1|AAP97319.1|  392|Homo sapiens unknown protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 163 CQLALAQNNRFVTHWLETHNCENKSK 86
           C   L +    + HW   HNCE+ SK
Sbjct: 345 CAEMLGRKEDLLHHWKHQHNCEDPSK 370


>AF428258-1|AAP97298.1|  828|Homo sapiens hypothetical protein
           protein.
          Length = 828

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 163 CQLALAQNNRFVTHWLETHNCENKSK 86
           C   L +    + HW   HNCE+ SK
Sbjct: 781 CAEMLGRKEDLLHHWKHQHNCEDPSK 806


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,560,213
Number of Sequences: 237096
Number of extensions: 304795
Number of successful extensions: 595
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 76,859,062
effective HSP length: 38
effective length of database: 67,849,414
effective search space used: 1356988280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)