Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_K11
         (177 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   1.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   2.4  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           20   2.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   2.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   4.2  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    19   4.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          19   7.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      19   7.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      18   9.6  

>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 157 LALAQNNRFVTHWLETHNCENKSKQVT 77
           L L++  R+V+ W E +  +N  K+ T
Sbjct: 220 LRLSRLVRYVSQWEEVYILQNLQKKRT 246


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 121 WLETHNCENKSKQVTLWVYSKFKNL 47
           W +T N   K+KQV  ++    +N+
Sbjct: 242 WTQTENSLEKAKQVGAFMGCPTRNV 266


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 121 WLETHNCENKSKQVTLWVYSKFKNL 47
           W +T N   K+KQV  ++    +N+
Sbjct: 113 WTQTENSLEKAKQVGAFMGCPTRNV 137


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 121 WLETHNCENKSKQVTLWVYSKFKNL 47
           W +T N   K+KQV  ++    +N+
Sbjct: 242 WTQTENSLEKAKQVGAFMGCPTRNV 266


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -1

Query: 111 LTTAKTKVNKLLYGFILNLKICSARNSRVASALGRY 4
           LT  K   NK      LN++  S + + + +  GR+
Sbjct: 100 LTVKKNFANKYCGNITLNIESTSNKMTVILTPPGRF 135


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 97  FRSCESPASELRNGYFV 147
           FR+      E+ NGYF+
Sbjct: 112 FRNISEKYQEIFNGYFL 128



 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 83  LFTFVFAVVSL 115
           +F FVFAV  L
Sbjct: 14  IFNFVFAVCGL 24


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 12  RGRSRRANYERYKFLNL 62
           R R     Y +YK+LN+
Sbjct: 312 RNRFSSLPYYKYKYLNV 328


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 12  RGRSRRANYERYKFLNL 62
           R R     Y +YK+LN+
Sbjct: 312 RNRFSSLPYYKYKYLNV 328


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = -1

Query: 171 TSTVN*HSHKITVS*LTGWRLTTAKTKVNKLLY 73
           T T   +   I  +  +GW L       NKL+Y
Sbjct: 190 TKTSGKYKEYIIPANYSGWYLNHDYNLENKLIY 222


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,724
Number of Sequences: 438
Number of extensions: 552
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 38
effective length of database: 129,699
effective search space used:  2593980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)