Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_K10
(300 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 79 8e-16
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 79 8e-16
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 54 1e-08
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 54 1e-08
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 52 8e-08
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 52 8e-08
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 49 5e-07
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 49 5e-07
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 49 5e-07
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 48 1e-06
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 48 1e-06
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 46 5e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 46 7e-06
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 46 7e-06
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 45 1e-05
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 45 1e-05
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 45 1e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 44 2e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 43 5e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 43 5e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 43 5e-05
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 42 8e-05
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 42 1e-04
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 42 1e-04
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 42 1e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 42 1e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 42 1e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 42 1e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 42 1e-04
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 41 1e-04
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 40 3e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 40 3e-04
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 39 6e-04
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 39 6e-04
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 39 8e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 38 0.001
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 38 0.001
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 38 0.001
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 38 0.001
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 38 0.001
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 38 0.001
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 38 0.001
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 38 0.002
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 38 0.002
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 37 0.002
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 37 0.002
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 37 0.002
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.003
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.003
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 37 0.003
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 36 0.005
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 36 0.005
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 36 0.005
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 36 0.005
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 36 0.005
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 36 0.007
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 36 0.007
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 35 0.012
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 35 0.012
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 35 0.012
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 34 0.016
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 34 0.016
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 34 0.022
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 34 0.022
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.029
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.029
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 33 0.029
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 33 0.050
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 33 0.050
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.050
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 33 0.050
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 32 0.067
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 32 0.067
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 32 0.088
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 31 0.12
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 31 0.12
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 31 0.12
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 31 0.12
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 30 0.27
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 30 0.27
AY394006-1|AAQ96373.1| 377|Caenorhabditis elegans endophilin pr... 30 0.35
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 30 0.35
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 30 0.35
AF067617-2|AAC17558.3| 377|Caenorhabditis elegans Uncoordinated... 30 0.35
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 30 0.35
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 30 0.35
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 0.62
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 29 0.62
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 29 0.62
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 29 0.82
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 28 1.1
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 28 1.1
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 28 1.1
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 28 1.4
U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 28 1.4
U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 27 1.9
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 27 1.9
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 27 1.9
U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defecti... 27 1.9
U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defecti... 27 1.9
U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defecti... 27 1.9
AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity... 27 1.9
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p... 27 2.5
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 27 2.5
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein. 27 2.5
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 27 2.5
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 27 2.5
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 27 2.5
U50312-2|AAA92319.2| 477|Caenorhabditis elegans Hypothetical pr... 27 3.3
AL008868-1|CAA15515.2| 213|Caenorhabditis elegans Hypothetical ... 27 3.3
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 27 3.3
U51999-8|AAA96090.2| 465|Caenorhabditis elegans Glutamate recep... 26 4.4
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 26 4.4
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 26 4.4
AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical ... 26 4.4
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 26 4.4
AF318611-1|AAK01099.1| 436|Caenorhabditis elegans ionotropic gl... 26 4.4
Z79754-1|CAB02090.1| 457|Caenorhabditis elegans Hypothetical pr... 26 5.8
U80437-7|AAB37622.2| 295|Caenorhabditis elegans Nudix family pr... 26 5.8
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 26 5.8
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 26 5.8
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 26 5.8
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 25 7.6
L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protei... 25 7.6
L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeo... 25 7.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 25 7.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 25 7.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 25 7.6
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 25 7.6
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 78.6 bits (185), Expect = 8e-16
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = +2
Query: 50 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNEAIKELNGMMVD 229
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH++ DV+ I L G +D
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTID 61
Query: 230 GQPMKVQLSTSRVRQRPGM 286
G+ + ++ STS++R PGM
Sbjct: 62 GKVVNIKKSTSKLRPTPGM 80
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 78.6 bits (185), Expect = 8e-16
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = +2
Query: 50 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNEAIKELNGMMVD 229
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH++ DV+ I L G +D
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTID 61
Query: 230 GQPMKVQLSTSRVRQRPGM 286
G+ + ++ STS++R PGM
Sbjct: 62 GKVVNIKKSTSKLRPTPGM 80
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 54.4 bits (125), Expect = 1e-08
Identities = 25/81 (30%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLDATGDVNEAIKELN 214
++ V N+ + R P+++ +F+KFG V + +I+ N +GFV ++ D A +EL+
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELH 213
Query: 215 GMMVDGQPMKVQLSTSRVRQR 277
G M++G+ ++V +T+RV +
Sbjct: 214 GSMIEGRKIEVNCATARVHSK 234
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 54.4 bits (125), Expect = 1e-08
Identities = 25/81 (30%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLDATGDVNEAIKELN 214
++ V N+ + R P+++ +F+KFG V + +I+ N +GFV ++ D A +EL+
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELH 213
Query: 215 GMMVDGQPMKVQLSTSRVRQR 277
G M++G+ ++V +T+RV +
Sbjct: 214 GSMIEGRKIEVNCATARVHSK 234
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 52.0 bits (119), Expect = 8e-08
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLDATGDVNEAIKELN 214
++ V N+ K R P++ +F+K G VV+ +I+ N +GFV + D + A E N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160
Query: 215 GMMVDGQPMKVQLSTSRVRQR 277
G ++G+ ++V L+T RV +
Sbjct: 161 GTTIEGRRVEVNLATQRVHNK 181
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 52.0 bits (119), Expect = 8e-08
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLDATGDVNEAIKELN 214
++ V N+ K R P++ +F+K G VV+ +I+ N +GFV + D + A E N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160
Query: 215 GMMVDGQPMKVQLSTSRVRQR 277
G ++G+ ++V L+T RV +
Sbjct: 161 GTTIEGRRVEVNLATQRVHNK 181
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 49.2 bits (112), Expect = 5e-07
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR---NYGFVHLDATGDVNEAIKELNGMM 223
K++VG L + E+ E+F +FG + + + R + FV D D +A++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 224 VDGQPMKVQLSTSRVRQRPGMG 289
+ G +V+LST + R G G
Sbjct: 64 ICGVRARVELSTGQRRGGGGRG 85
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 49.2 bits (112), Expect = 5e-07
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR---NYGFVHLDATGDVNEAIKELNGMM 223
K++VG L + E+ E+F +FG + + + R + FV D D +A++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 224 VDGQPMKVQLSTSRVRQRPGMG 289
+ G +V+LST + R G G
Sbjct: 64 ICGVRARVELSTGQRRGGGGRG 85
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 49.2 bits (112), Expect = 5e-07
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR---NYGFVHLDATGDVNEAIKELNGMM 223
K++VG L + E+ E+F +FG + + + R + FV D D +A++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 224 VDGQPMKVQLSTSRVRQRPGMG 289
+ G +V+LST + R G G
Sbjct: 64 ICGVRARVELSTGQRRGGGGRG 85
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 48.0 bits (109), Expect = 1e-06
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +2
Query: 29 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGDVNEAIK 205
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD A +
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKE 168
Query: 206 ELNGMMVDGQPMKVQLS 256
++G ++ G+ ++V+ +
Sbjct: 169 AIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 48.0 bits (109), Expect = 1e-06
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +2
Query: 29 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGDVNEAIK 205
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD A +
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKE 168
Query: 206 ELNGMMVDGQPMKVQLS 256
++G ++ G+ ++V+ +
Sbjct: 169 AIDGRIIHGRQVRVRFA 185
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 46.0 bits (104), Expect = 5e-06
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG----FVHLDATGDVNEAIKELNGM 220
K++VGNL R EV ++F K+G + DI G FV + D +A++ +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 221 MVDGQPMKVQLSTSRVRQRPGMGEP 295
DG+ ++V+ + + PG G P
Sbjct: 70 EFDGRRIRVEFTRGVGPRGPG-GRP 93
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 45.6 bits (103), Expect = 7e-06
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Frame = +2
Query: 20 EGRKAPSTPTT-KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHL 172
E R P T +FVG+L + + ++RE F KFG V E I+R+ YGFV
Sbjct: 121 ENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
Query: 173 DATGDVNEAIKELNGMMVDGQPMKVQLSTSR 265
D AI E+NG + + ++ +T +
Sbjct: 181 PRREDAERAIDEMNGAWLGRRTIRTNWATRK 211
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 45.6 bits (103), Expect = 7e-06
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG----FVHLDATGDVNEAIKELNGM 220
K++VGNL R EV ++F K+G + DI G FV + D +A++ +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 221 MVDGQPMKVQLSTSRVRQRPGMGEP 295
DG+ ++V+ T V R G P
Sbjct: 70 EFDGRRIRVEF-TRGVGPRGPSGRP 93
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 44.8 bits (101), Expect = 1e-05
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNEAIKELNGMMVDG 232
+I++G LT + ++ F+ +G + + + +GFV D D +A+ +LNG + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 233 QPMKVQLSTSR 265
+ + + S R
Sbjct: 64 ERVILDYSKPR 74
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 44.8 bits (101), Expect = 1e-05
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNEAIKELNGMMVDG 232
+I++G LT + ++ F+ +G + + + +GFV D D +A+ +LNG + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 233 QPMKVQLSTSR 265
+ + + S R
Sbjct: 64 ERVILDYSKPR 74
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 44.8 bits (101), Expect = 1e-05
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNEAIKELNGMMVDG 232
+I++G LT + ++ F+ +G + + + +GFV D D +A+ +LNG + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 233 QPMKVQLSTSR 265
+ + + S R
Sbjct: 64 ERVILDYSKPR 74
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 44.0 bits (99), Expect = 2e-05
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +2
Query: 50 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNEAIKELNGMM 223
T ++VGN++ +T ++R+LF +G + E I + Y FV + +AI E+NG
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKE 296
Query: 224 VDGQPMKVQLSTSRVRQRP 280
+ G +V+ S R + P
Sbjct: 297 MAGN--QVRCSWGRTQAVP 313
Score = 31.9 bits (69), Expect = 0.088
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNEAIKEL 211
+FVG+L+ ++ F KFG V E ++R+ YGFV + AI +
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 212 NGMMV 226
NG +
Sbjct: 197 NGKWI 201
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 42.7 bits (96), Expect = 5e-05
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNEAIKELN 214
IF+ NL + + F FG ++ C + + YGFVH + AI+++N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 215 GMMVDGQPMKVQLSTSRVRQRPGMGE 292
GM++ G+ + V R ++ +GE
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGE 207
Score = 35.9 bits (79), Expect = 0.005
Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +2
Query: 50 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATGDVNEAIKEL 211
T ++V N D + ++F KFG + C+++ + +GFV + A++ L
Sbjct: 213 TNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 212 NGMMVDGQPMKVQL 253
+ ++G +K+ +
Sbjct: 273 HDSTIEGTDLKLHV 286
Score = 33.9 bits (74), Expect = 0.022
Identities = 17/95 (17%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Frame = +2
Query: 14 RHEGRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHL 172
+H+ + ++V NL + +++ F+ +G + ++ + +GFV
Sbjct: 305 QHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCF 364
Query: 173 DATGDVNEAIKELNGMMVDGQPMKVQLSTSRVRQR 277
+ + A+ E+N MV +P+ V + + +R
Sbjct: 365 EKPEEATSAVTEMNSKMVCSKPLYVAIGQRKEDRR 399
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 42.7 bits (96), Expect = 5e-05
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNEAIKELN 214
IF+ NL + + F FG ++ C + + YGFVH + AI+++N
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 118
Query: 215 GMMVDGQPMKVQLSTSRVRQRPGMGE 292
GM++ G+ + V R ++ +GE
Sbjct: 119 GMLLAGKKVFVGKFQPRAQRNRELGE 144
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +2
Query: 50 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATGDVNEAIKEL 211
T ++V N D + +LF KFG + C+++ + +GFV + A++ L
Sbjct: 150 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 209
Query: 212 NGMMVDGQPMKVQL 253
+ ++G +K+ +
Sbjct: 210 HDSTIEGTDLKLHV 223
Score = 34.3 bits (75), Expect = 0.016
Identities = 17/95 (17%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Frame = +2
Query: 14 RHEGRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHL 172
+H+ + ++V NL + +++ F+ +G + ++ + +GFV
Sbjct: 242 QHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCF 301
Query: 173 DATGDVNEAIKELNGMMVDGQPMKVQLSTSRVRQR 277
+ + A+ E+N MV +P+ V ++ + +R
Sbjct: 302 EKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRR 336
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 42.7 bits (96), Expect = 5e-05
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNEAIKELN 214
IF+ NL + + F FG ++ C + + YGFVH + AI+++N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 215 GMMVDGQPMKVQLSTSRVRQRPGMGE 292
GM++ G+ + V R ++ +GE
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGE 207
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +2
Query: 50 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATGDVNEAIKEL 211
T ++V N D + +LF KFG + C+++ + +GFV + A++ L
Sbjct: 213 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 212 NGMMVDGQPMKVQL 253
+ ++G +K+ +
Sbjct: 273 HDSTIEGTDLKLHV 286
Score = 34.3 bits (75), Expect = 0.016
Identities = 17/95 (17%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Frame = +2
Query: 14 RHEGRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHL 172
+H+ + ++V NL + +++ F+ +G + ++ + +GFV
Sbjct: 305 QHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCF 364
Query: 173 DATGDVNEAIKELNGMMVDGQPMKVQLSTSRVRQR 277
+ + A+ E+N MV +P+ V ++ + +R
Sbjct: 365 EKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRR 399
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 41.9 bits (94), Expect = 8e-05
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Frame = +2
Query: 44 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNEA 199
P+ + V NL+ T ++R++F +FG + +CD+V R +GF++ + D A
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
Query: 200 IKELNGMMVDGQPMKVQLSTSRVRQRPGMGE 292
+L +DG ++V S ++ P G+
Sbjct: 134 RDKLCNTDLDGHKIRVDFSLTKRGHSPTPGQ 164
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNEAIKELN 214
IF+ NL V + F FG ++ C + + YGFVH + AI+++N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 215 GMMVDGQPMKVQLSTSRVRQRPGMGE 292
GM++ + + V R ++ +GE
Sbjct: 207 GMLLSDKKVYVGKFQPRAQRMKELGE 232
Score = 30.7 bits (66), Expect = 0.20
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = +2
Query: 50 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNEAIKE 208
T +FV N + ++ +F KFG + ++ + +GFV +A+++
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 209 LNGMMVDGQPMKVQLSTSRVRQR 277
LN +++G K LS R +++
Sbjct: 298 LNDSILEGTDCK--LSVCRAQKK 318
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNEAIKELN 214
IF+ NL V + F FG ++ C + + YGFVH + AI+++N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 215 GMMVDGQPMKVQLSTSRVRQRPGMGE 292
GM++ + + V R ++ +GE
Sbjct: 207 GMLLSDKKVYVGKFQPRAQRMKELGE 232
Score = 30.7 bits (66), Expect = 0.20
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = +2
Query: 50 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNEAIKE 208
T +FV N + ++ +F KFG + ++ + +GFV +A+++
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 209 LNGMMVDGQPMKVQLSTSRVRQR 277
LN +++G K LS R +++
Sbjct: 298 LNDSILEGTDCK--LSVCRAQKK 318
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Frame = +2
Query: 107 LFQKFGTVVECDIVRN------YGFVHLDATGDVNEAIKELNGMMVDGQPMKVQLSTSRV 268
+F+K G VV+ +I+ N +GFV + D + A E NG ++G+ ++V L+T RV
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRV 60
Query: 269 RQR 277
+
Sbjct: 61 HNK 63
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Frame = +2
Query: 29 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATG 184
K +T +FVG+L+ + ++RE FQ FG V + ++R+ YGFV
Sbjct: 15 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 74
Query: 185 DVNEAIKELNGMMVDGQPMKVQLSTSR 265
+ AI+++NG + + ++ +T +
Sbjct: 75 EAERAIEQMNGQWLGRRTIRTNWATRK 101
Score = 39.5 bits (88), Expect = 4e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 38 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNEAIKEL 211
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D +AI ++
Sbjct: 124 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQM 182
Query: 212 NGMMVDGQ 235
N V GQ
Sbjct: 183 NNQDVGGQ 190
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Frame = +2
Query: 29 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATG 184
K +T +FVG+L+ + ++RE FQ FG V + ++R+ YGFV
Sbjct: 25 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 84
Query: 185 DVNEAIKELNGMMVDGQPMKVQLSTSR 265
+ AI+++NG + + ++ +T +
Sbjct: 85 EAERAIEQMNGQWLGRRTIRTNWATRK 111
Score = 39.5 bits (88), Expect = 4e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 38 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNEAIKEL 211
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D +AI ++
Sbjct: 134 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQM 192
Query: 212 NGMMVDGQ 235
N V GQ
Sbjct: 193 NNQDVGGQ 200
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Frame = +2
Query: 29 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATG 184
K +T +FVG+L+ + ++RE FQ FG V + ++R+ YGFV
Sbjct: 128 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 187
Query: 185 DVNEAIKELNGMMVDGQPMKVQLSTSR 265
+ AI+++NG + + ++ +T +
Sbjct: 188 EAERAIEQMNGQWLGRRTIRTNWATRK 214
Score = 39.5 bits (88), Expect = 4e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 38 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNEAIKEL 211
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D +AI ++
Sbjct: 237 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQM 295
Query: 212 NGMMVDGQ 235
N V GQ
Sbjct: 296 NNQDVGGQ 303
Score = 32.3 bits (70), Expect = 0.067
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-----YGFVHLDATGDVNEAIKELNGM 220
++VGNL + LF + G+V + ++ + Y FV G ++A++ +N
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNKR 107
Query: 221 MVDGQPMKVQLSTSRVRQR 277
++ + MKV + +Q+
Sbjct: 108 LLLDREMKVNWAVEPGQQQ 126
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Frame = +2
Query: 29 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATG 184
K +T +FVG+L+ + ++RE FQ FG V + ++R+ YGFV
Sbjct: 96 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 155
Query: 185 DVNEAIKELNGMMVDGQPMKVQLSTSR 265
+ AI+++NG + + ++ +T +
Sbjct: 156 EAERAIEQMNGQWLGRRTIRTNWATRK 182
Score = 39.5 bits (88), Expect = 4e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 38 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNEAIKEL 211
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D +AI ++
Sbjct: 205 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQM 263
Query: 212 NGMMVDGQ 235
N V GQ
Sbjct: 264 NNQDVGGQ 271
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 41.1 bits (92), Expect = 1e-04
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +2
Query: 38 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV---------RNYGFVHLDATGDV 190
++P ++ + NL+ + E+F +G + D+ R YG+V D D
Sbjct: 129 ASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDA 188
Query: 191 NEAIKELNGMMVDGQPMKVQLSTSR 265
++IK ++G +DG + V+++ R
Sbjct: 189 EKSIKHMDGGQIDGMAVHVEMTIGR 213
Score = 31.9 bits (69), Expect = 0.088
Identities = 29/83 (34%), Positives = 36/83 (43%)
Frame = -2
Query: 266 RGSSTAAPSWVARPPSCHSTL*WPRSRHPSRPNVRSHSYARYRTRPPSRTSGTARGPPAR 87
R SS+++ S S S+ S S RS S R TRPP+R G +R P R
Sbjct: 12 RSSSSSSSSSSGSSSSGSSSSGSRSSSSSSSGRSRSRSPRRRDTRPPAR-GGRSRSPIRR 70
Query: 86 ASCPLGYRRIF*WSASRAPSCPR 18
S P G R +PS PR
Sbjct: 71 GSPPRGARADRDRPMRPSPSPPR 93
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 40.3 bits (90), Expect = 3e-04
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Frame = +2
Query: 20 EGRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLDA 178
E +A P +FVG + +T ++R F+ +G + + +V R Y F+
Sbjct: 94 ENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSD 153
Query: 179 TGDVNEAIKELNGMMVDGQPMKVQLSTSRVRQ 274
+++ A K+ +G+ VDG+ + V R ++
Sbjct: 154 KAEMHTAYKKADGIKVDGKRLVVDYERGRTQK 185
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 40.3 bits (90), Expect = 3e-04
Identities = 15/67 (22%), Positives = 39/67 (58%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNEAIKELNGMMVDGQ 235
+++ N+ + ++ ELF+++ ++ V++Y F+H + D +A++E NG ++G
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGT 438
Query: 236 PMKVQLS 256
++ L+
Sbjct: 439 VVEASLA 445
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 39.1 bits (87), Expect = 6e-04
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +2
Query: 29 KAPSTPTTKIFVGNLTDKT-RAPEVRELFQKFGTVVECDIV--RNYGFVHLDATGDVNEA 199
K P ++F+GN+ ++ ELF+ FG ++ + + +GFV + G +E+
Sbjct: 76 KDPHMIRARVFIGNIARAIITRDDIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSADES 135
Query: 200 IKELNGM 220
+ LNGM
Sbjct: 136 CRSLNGM 142
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 39.1 bits (87), Expect = 6e-04
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Frame = +2
Query: 41 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNE 196
T TKIFVG L T + E F++FG + E ++ R YGFV +
Sbjct: 32 TMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAER 91
Query: 197 AIKELNGMMVDGQPMKVQLS 256
A K+ N ++DG+ V L+
Sbjct: 92 ACKDPN-PIIDGRKANVNLA 110
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 38.7 bits (86), Expect = 8e-04
Identities = 18/82 (21%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNEAIKELNGMMVDG 232
++++G L ++ +V F+ +G + + + +GFV D ++A+ +LNG + G
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62
Query: 233 QPMKVQLSTSRV---RQRPGMG 289
+ + ++ +V +R G G
Sbjct: 63 ERVILEFPRRKVGYNEERSGSG 84
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 35 PSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 37.1 bits (82), Expect = 0.002
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 29.1 bits (62), Expect = 0.62
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 155 YGFVHLDATGDVNEAIKELNGMMVDGQPMKVQLSTSR 265
+GFV + AI +NG + + +KVQL R
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 35 PSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 37.1 bits (82), Expect = 0.002
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 29.1 bits (62), Expect = 0.62
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 155 YGFVHLDATGDVNEAIKELNGMMVDGQPMKVQLSTSR 265
+GFV + AI +NG + + +KVQL R
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 35 PSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 37.1 bits (82), Expect = 0.002
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 29.1 bits (62), Expect = 0.62
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 155 YGFVHLDATGDVNEAIKELNGMMVDGQPMKVQLSTSR 265
+GFV + AI +NG + + +KVQL R
Sbjct: 471 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 507
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 35 PSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 37.1 bits (82), Expect = 0.002
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 35 PSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 37.1 bits (82), Expect = 0.002
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 35 PSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 37.1 bits (82), Expect = 0.002
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 35 PSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 37.1 bits (82), Expect = 0.002
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 29.1 bits (62), Expect = 0.62
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 155 YGFVHLDATGDVNEAIKELNGMMVDGQPMKVQLSTSR 265
+GFV + AI +NG + + +KVQL R
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 37.5 bits (83), Expect = 0.002
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Frame = +2
Query: 26 RKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDA 178
R AP T + + NL+ +T ++R F+++G + + I R+ +GFV
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 179 TGDVNEAIKELNGMMVDGQPMKVQLS 256
D A+ +G +VDG+ ++V L+
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 37.5 bits (83), Expect = 0.002
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Frame = +2
Query: 26 RKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDA 178
R AP T + + NL+ +T ++R F+++G + + I R+ +GFV
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 179 TGDVNEAIKELNGMMVDGQPMKVQLS 256
D A+ +G +VDG+ ++V L+
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLA 95
Score = 29.5 bits (63), Expect = 0.47
Identities = 24/61 (39%), Positives = 29/61 (47%)
Frame = -2
Query: 194 RSRHPSRPNVRSHSYARYRTRPPSRTSGTARGPPARASCPLGYRRIF*WSASRAPSCPRA 15
RSR P R RS S R+R P R+ R PP+R RR S SR+P PR
Sbjct: 115 RSRSPRR---RSRSPRYSRSRSPRRSRSRTRSPPSRDRRDSPDRRDNSRSRSRSPP-PRE 170
Query: 14 E 12
+
Sbjct: 171 D 171
Score = 28.3 bits (60), Expect = 1.1
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = -2
Query: 200 WPRSRHPSRPNVRSHSY-ARYRTRPPSRTSGT---ARGPPARASCPLGYRRIF*WSASRA 33
+ RSR P R R+ S +R R P R + +R PP R RR SASR+
Sbjct: 128 YSRSRSPRRSRSRTRSPPSRDRRDSPDRRDNSRSRSRSPPPREDGSPKERRSRSRSASRS 187
Query: 32 PSCPRA 15
PS R+
Sbjct: 188 PSRSRS 193
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNEAIKEL 211
++VGN +T E+ F G + IV R + F+ G A++++
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 212 NGMMVDGQPMKVQLS 256
NG +G+P++V L+
Sbjct: 67 NGAEFNGRPLRVNLA 81
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +2
Query: 50 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATGDVNEAIKEL 211
T ++V N D + +LF KFG + C+++ + +GFV + A++ L
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 212
Query: 212 NGMMVDGQPMKVQL 253
+ ++G +K+ +
Sbjct: 213 HDSTIEGTDLKLHV 226
Score = 34.3 bits (75), Expect = 0.016
Identities = 17/95 (17%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Frame = +2
Query: 14 RHEGRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHL 172
+H+ + ++V NL + +++ F+ +G + ++ + +GFV
Sbjct: 245 QHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCF 304
Query: 173 DATGDVNEAIKELNGMMVDGQPMKVQLSTSRVRQR 277
+ + A+ E+N MV +P+ V ++ + +R
Sbjct: 305 EKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRR 339
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 37.1 bits (82), Expect = 0.002
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Frame = +2
Query: 104 ELFQKFGT----VVECDIVRNYGFVHLDATGDVNEAIKELNGMMVDGQPMKVQL----ST 259
EL+Q FG VV+C + YGFV D + + I E++G ++G+ + V +
Sbjct: 111 ELYQAFGGITDGVVQCHVADGYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWARPDTV 170
Query: 260 SRVRQRP 280
R R+RP
Sbjct: 171 GRKRKRP 177
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Frame = +2
Query: 44 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNEA 199
P +FV L T ++ +F +FG + C+IVR+ Y F+ D +A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 200 IKELNGMMVDGQPMKVQLSTS 262
+++ +++D + + V S S
Sbjct: 299 FFKMDNVLIDDRRIHVDFSQS 319
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Frame = +2
Query: 44 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNEA 199
P +FV L T ++ +F +FG + C+IVR+ Y F+ D +A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 200 IKELNGMMVDGQPMKVQLSTS 262
+++ +++D + + V S S
Sbjct: 299 FFKMDNVLIDDRRIHVDFSQS 319
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Frame = +2
Query: 44 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNEA 199
P +FV L T ++ +F +FG + C+IVR+ Y F+ D +A
Sbjct: 170 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 229
Query: 200 IKELNGMMVDGQPMKVQLSTS 262
+++ +++D + + V S S
Sbjct: 230 FFKMDNVLIDDRRIHVDFSQS 250
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 35.9 bits (79), Expect = 0.005
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNEAIKEL 211
+FVGN++ +R +F K G V+ +V + YGF+ AI+ L
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 212 NGMMVDGQPMKV 247
NG + G+ ++V
Sbjct: 80 NGYELSGRILRV 91
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 35.9 bits (79), Expect = 0.005
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Frame = +2
Query: 50 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNEAIK 205
T + + L EVR LF G + C +VR+ YGFV+ D A+
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 206 ELNGMMVDGQPMKV 247
NG+ + + +KV
Sbjct: 102 SFNGLRLQNKTIKV 115
Score = 34.3 bits (75), Expect = 0.016
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNEAIKELN 214
+FV NL+ T + +LF +FG +V I+R+ Y FV + + A+ LN
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLN 435
Query: 215 GMMVDGQPMKVQLSTS 262
G + G+ ++V +S
Sbjct: 436 GTNLAGKTLQVVFKSS 451
Score = 30.3 bits (65), Expect = 0.27
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Frame = +2
Query: 50 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNEAIK 205
+ ++V + E+ +F+ FG ++ I+ + GFV D + + AIK
Sbjct: 128 SNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIK 187
Query: 206 ELNGMMVDG 232
LNG + G
Sbjct: 188 TLNGSIPSG 196
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 35.9 bits (79), Expect = 0.005
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNEAIKE 208
KIFVG LT T +RE + +FG + + ++R+ +GFV +V+ A+K+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 209 LNGMMVDGQPMKVQLSTSR 265
++DG+ + + + R
Sbjct: 84 -RPHIIDGKTVDPKRAVPR 101
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 35.9 bits (79), Expect = 0.005
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNEAIKE 208
KIFVG LT T +RE + +FG + + ++R+ +GFV +V+ A+K+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 209 LNGMMVDGQPMKVQLSTSR 265
++DG+ + + + R
Sbjct: 84 -RPHIIDGKTVDPKRAVPR 101
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 35.9 bits (79), Expect = 0.005
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNEAIKE 208
KIFVG LT T +RE + +FG + + ++R+ +GFV +V+ A+K+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 209 LNGMMVDGQPMKVQLSTSR 265
++DG+ + + + R
Sbjct: 84 -RPHIIDGKTVDPKRAVPR 101
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 35.5 bits (78), Expect = 0.007
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Frame = +2
Query: 50 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNEAIKE 208
+K+FV N+ + E++ LF KFGTV V + FV D + +
Sbjct: 683 SKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCVAS 742
Query: 209 LNGMMVDGQPMKVQLSTSRVRQRPGMGEP 295
+ +M+ + ++V LS V++ G+P
Sbjct: 743 GDKLMLRERELEVALSNPPVKKDKSHGKP 771
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 35.5 bits (78), Expect = 0.007
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 29 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHL 172
K T ++FVGNL ++ + E++ELF G + EC + + + F+ L
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRL 157
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 34.7 bits (76), Expect = 0.012
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Frame = +2
Query: 38 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR-------NYGFVHLDATGDVNE 196
S P I +G + KT ++ F+ GTVV C+I R +GFV + + G+ N+
Sbjct: 170 SQPVDLIVLG-VDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQNK 228
Query: 197 AIKELNGMMVDGQPMKVQLSTSRVRQ-RPGM 286
+ + M+DG+ V++ R +Q RP +
Sbjct: 229 VL-AIPQHMIDGRRCDVKVPDGRDKQGRPSI 258
Score = 30.7 bits (66), Expect = 0.20
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Frame = +2
Query: 20 EGRKAPSTPT-TKIFVGNLTDKTRAPEVRELF-----QKFGTVVECDI-----VRNYGFV 166
+GR P+ ++IFVG LTDK ++R++F T V D+ R + FV
Sbjct: 248 DGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFV 307
Query: 167 HLDATGDVNEAIKELNGMMVDGQPMKVQLSTSRVRQRPGMG 289
L ++ + E I + V+G + + ++ R +G
Sbjct: 308 TL-SSAEAAERIVSKGSLTVNGLSVGLSIAQPREENNQSVG 347
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.012
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.012
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.016
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNEAIKEL 211
+IFVG T E+RE F+KF V + +V++ YGF+ + T D E I++L
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFE-TEDQAEEIRKL 125
Query: 212 NGMMVDGQPMKVQL 253
++ + K+ L
Sbjct: 126 TPKQLEFRSRKLNL 139
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 34.3 bits (75), Expect = 0.016
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNEAIKEL 211
+IFVG T E+RE F+KF V + +V++ YGF+ + T D E I++L
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFE-TEDQAEEIRKL 126
Query: 212 NGMMVDGQPMKVQL 253
++ + K+ L
Sbjct: 127 TPKQLEFRSRKLNL 140
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 33.9 bits (74), Expect = 0.022
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNEAIKEL 211
+F+ +L + E+ ++F FG +V + + +GFV D AI +
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 212 NGMMVDGQPMKVQLSTSRVRQRP 280
NG + + +KVQL R RP
Sbjct: 491 NGFQIGMKRLKVQLKRPRNESRP 513
Score = 29.5 bits (63), Expect = 0.47
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
Score = 29.5 bits (63), Expect = 0.47
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 151
K+F+G L+ + EVR LF FG + E ++R
Sbjct: 125 KLFIGMLSKQQSEDEVRALFATFGELDEVTVLR 157
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 33.9 bits (74), Expect = 0.022
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNEAIKEL 211
+F+ +L + E+ ++F FG +V + + +GFV D AI +
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 212 NGMMVDGQPMKVQLSTSRVRQRP 280
NG + + +KVQL R RP
Sbjct: 491 NGFQIGMKRLKVQLKRPRNESRP 513
Score = 29.5 bits (63), Expect = 0.47
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 154
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
Score = 29.5 bits (63), Expect = 0.47
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 151
K+F+G L+ + EVR LF FG + E ++R
Sbjct: 125 KLFIGMLSKQQSEDEVRALFATFGELDEVTVLR 157
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.029
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNEAIKEL 211
I+VG L +K + EL + G VV ++ ++ +GFV D + AIK L
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 212 NGMMVDGQPMKVQLSTS 262
N + + G+P+KV +++
Sbjct: 75 NMIKLYGKPIKVNKASA 91
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.029
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNEAIKEL 211
I+VG L +K + EL + G VV ++ ++ +GFV D + AIK L
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 212 NGMMVDGQPMKVQLSTS 262
N + + G+P+KV +++
Sbjct: 85 NMIKLYGKPIKVNKASA 101
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 33.5 bits (73), Expect = 0.029
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNEAIKE 208
++F G+L ++ + + F+K+ + + +VR YGFV + D A++E
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 209 LNGMMVDGQPMKVQLSTSRVR 271
++G V +P+K++ S + R
Sbjct: 264 MDGKYVGNRPIKLRKSAWKER 284
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 32.7 bits (71), Expect = 0.050
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDI--------VRNYGFVHLDATGDVNEAIKEL 211
+F+GN+ + E+ E F+ G +V+ I +N+ ++ D + + A+ +
Sbjct: 57 VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VM 115
Query: 212 NGMMVDGQPMKVQLSTSRVRQRPGMG 289
NG + +P+ V T++ PGMG
Sbjct: 116 NGSLFRSRPIVV---TAKRTNIPGMG 138
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 32.7 bits (71), Expect = 0.050
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Frame = +2
Query: 47 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATGDVNEAIKE 208
T +FVGN+ + E+R +F++ G V E DI Y FV +A E
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 209 LNG--MMVDGQPMKVQLSTSRVRQRPGMG 289
+ G MK+ S+V +R +G
Sbjct: 228 EQDRPIRAGGSRMKIGYGKSQVSRRLFVG 256
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 32.7 bits (71), Expect = 0.050
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Frame = +2
Query: 47 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATGDVNEAIKE 208
T +FVGN+ + E+R +F++ G V E DI Y FV +A E
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 209 LNG--MMVDGQPMKVQLSTSRVRQRPGMG 289
+ G MK+ S+V +R +G
Sbjct: 228 EQDRPIRAGGSRMKIGYGKSQVSRRLFVG 256
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 32.7 bits (71), Expect = 0.050
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Frame = +2
Query: 47 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATGDVNEAIKE 208
T +FVGN+ + E+R +F++ G V E DI Y FV +A E
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 204
Query: 209 LNG--MMVDGQPMKVQLSTSRVRQRPGMG 289
+ G MK+ S+V +R +G
Sbjct: 205 EQDRPIRAGGSRMKIGYGKSQVSRRLFVG 233
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 32.3 bits (70), Expect = 0.067
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Frame = -2
Query: 299 ARARPC--PVAAGRGSSTAAPSWVARPPSCHSTL*WPRSRHPSR----PNVRSHSYARYR 138
AR RP V+A R ++ AP+ ARP + S R+ P R P S A R
Sbjct: 310 ARTRPAVPAVSAPRALTSRAPAGPARPTTTRSATPATRTAVPPRATAPPKAAPASKAPTR 369
Query: 137 TRPPSRTS-GTARGPPARA--SCPLGYRRIF*WSASRAPSCP 21
P+R++ RG PA+A + P+ +++ APS P
Sbjct: 370 APIPARSAPAPPRGAPAKAPKAEPIAQKKVAGKVQRAAPSKP 411
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 32.3 bits (70), Expect = 0.067
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTVVECDI--------VRNYGFVHLDATGDVNEAIKEL 211
+F+GN+ + EV E F+ G +V I +N+ ++ D + + A+ +
Sbjct: 63 VFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VM 121
Query: 212 NGMMVDGQPMKVQLSTSRVRQRPGMG 289
NG + +P+ V T++ PGMG
Sbjct: 122 NGSLFRSRPIVV---TAKRTNIPGMG 144
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 31.9 bits (69), Expect = 0.088
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +2
Query: 5 AGIRHEGRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI-----VRNYGFVH 169
A ++ G K P +++ NL K E+ E+F KFG V + + R FV
Sbjct: 4 ANRQNRGAKLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVV 63
Query: 170 LDATGDVNEAIKELNGMMVDGQPMKV 247
+ D A + L+G V + + V
Sbjct: 64 YEDIFDAKTACEHLSGYNVSNRYLVV 89
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 31.5 bits (68), Expect = 0.12
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNEAIKE 208
KIF+G L + +V+EL FG + + + Y F +LD T ++AI
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 350
Query: 209 LNGMMVDGQPMKVQLSTSRVRQRPGMGEP 295
LNGM + + + VQL+ + +QR P
Sbjct: 351 LNGMQLGDKQLVVQLACAN-QQRHNTNLP 378
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 31.5 bits (68), Expect = 0.12
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNEAIKE 208
KIF+G L + +V+EL FG + + + Y F +LD T ++AI
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 350
Query: 209 LNGMMVDGQPMKVQLSTSRVRQRPGMGEP 295
LNGM + + + VQL+ + +QR P
Sbjct: 351 LNGMQLGDKQLVVQLACAN-QQRHNTNLP 378
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 31.5 bits (68), Expect = 0.12
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNEAIKE 208
KIF+G L + +V+EL FG + + + Y F +LD T ++AI
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 325
Query: 209 LNGMMVDGQPMKVQLSTSRVRQRPGMGEP 295
LNGM + + + VQL+ + +QR P
Sbjct: 326 LNGMQLGDKQLVVQLACAN-QQRHNTNLP 353
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 31.5 bits (68), Expect = 0.12
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFV-HLDATGDVNEAIKE 208
KIF+G L + +V+EL FG + + + Y F +LD T ++AI
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 328
Query: 209 LNGMMVDGQPMKVQLSTSRVRQRPGMGEP 295
LNGM + + + VQL+ + +QR P
Sbjct: 329 LNGMQLGDKQLVVQLACAN-QQRHNTNLP 356
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 30.3 bits (65), Expect = 0.27
Identities = 15/73 (20%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR--------NYGFVHLDATGDVNEAIKE 208
+++V ++ +++ +F+ FG +V+C + R +G++ + +EAI
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 209 LNGMMVDGQPMKV 247
+N + GQ ++V
Sbjct: 268 MNMFDLGGQYLRV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 30.3 bits (65), Expect = 0.27
Identities = 15/73 (20%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = +2
Query: 53 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR--------NYGFVHLDATGDVNEAIKE 208
+++V ++ +++ +F+ FG +V+C + R +G++ + +EAI
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 209 LNGMMVDGQPMKV 247
+N + GQ ++V
Sbjct: 268 MNMFDLGGQYLRV 280
>AY394006-1|AAQ96373.1| 377|Caenorhabditis elegans endophilin
protein.
Length = 377
Score = 29.9 bits (64), Expect = 0.35
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -2
Query: 197 PRSRHPSRPNVRSHSYARYRTRPPSRTSGTARGPPARASCPLG 69
PRSR P+ P+ SH+ PP G + PP+ P G
Sbjct: 266 PRSRSPA-PSDMSHNSTAAAAMPPQNGGGITQAPPSYQGPPPG 307
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 0.35
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 163
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 0.35
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 163
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AF067617-2|AAC17558.3| 377|Caenorhabditis elegans Uncoordinated
protein 57, isoform a protein.
Length = 377
Score = 29.9 bits (64), Expect = 0.35
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -2
Query: 197 PRSRHPSRPNVRSHSYARYRTRPPSRTSGTARGPPARASCPLG 69
PRSR P+ P+ SH+ PP G + PP+ P G
Sbjct: 266 PRSRSPA-PSDMSHNSTAAAAMPPQNGGGITQAPPSYQGPPPG 307
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 29.9 bits (64), Expect = 0.35
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 163
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 107 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 144
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 29.9 bits (64), Expect = 0.35
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 56 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 163
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.1 bits (62), Expect = 0.62
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +2
Query: 155 YGFVHLDATGDVNEAIKELNGMMVDGQPMKVQLS 256
+GFV D A+K++ G ++DG +++++S
Sbjct: 691 FGFVQFYTAFDAKTALKDMQGELLDGHSLELKIS 724
Score = 28.7 bits (61), Expect = 0.82
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Frame = +2
Query: 47 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI-------VRNYGFVHLDATGDVNEAIK 205
TT++ V NL ++R+ F+K+G + + + R + FV G + A+
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALA 61
Query: 206 ELNGMMVDGQPMKVQ 250
+ N + + + V+
Sbjct: 62 KSNQTFFNSKKLTVE 76
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 14 RHEGRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG 160
R E ++ TK+ V NL + EV LF+ FG V I + G
Sbjct: 736 RKEVKQKEQGECTKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPG 784
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 29.1 bits (62), Expect = 0.62
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Frame = +2
Query: 38 STP--TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGD 187
STP +T +++ L T +RE+ K+G + + + YGFV ++
Sbjct: 75 STPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQA 134
Query: 188 VNEAIKELNGMMVDGQPMKVQ 250
A+ LN V Q K+Q
Sbjct: 135 AAAAVDGLNTEGVQAQMAKLQ 155
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 29.1 bits (62), Expect = 0.62
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 155 YGFVHLDATGDVNEAIKELNGMMVDGQPMKVQLSTSR 265
+GFV + AI +NG + + +KVQL R
Sbjct: 378 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 414
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 28.7 bits (61), Expect = 0.82
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Frame = +2
Query: 38 STPT-TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDV 190
+TP+ T +++ L T +RE+ K+G + + + YGFV ++
Sbjct: 102 TTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAA 161
Query: 191 NEAIKELNGMMVDGQPMKVQ 250
A+ LN V Q K+Q
Sbjct: 162 AAAVDGLNTEGVQAQMAKLQ 181
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 28.3 bits (60), Expect = 1.1
Identities = 23/64 (35%), Positives = 29/64 (45%)
Frame = -2
Query: 266 RGSSTAAPSWVARPPSCHSTL*WPRSRHPSRPNVRSHSYARYRTRPPSRTSGTARGPPAR 87
R S+ APS ARPPS P+ + +RP PPSR SG PP+R
Sbjct: 62 RTSTGRAPSARARPPSAMRAP-PPQPTYENRPTTGMSMRNGGPPVPPSR-SGMIPVPPSR 119
Query: 86 ASCP 75
+ P
Sbjct: 120 SGGP 123
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = -1
Query: 264 RLVDSCTFMGCPSTIMPFNSLMASFTSPVASKCTKP*LRTISHSTTVPNFWNSSRTSGAR 85
R V + T +T+ P + + T+P +P + T+ +TTVP++W+S++ R
Sbjct: 334 REVPTTTTTTTTTTVPPTTTRTTTTTTP------RPTVPTVPRTTTVPSWWSSAQAPRHR 387
Query: 84 VLSVR 70
S R
Sbjct: 388 DTSPR 392
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 95 EVRELFQKFGTVVECDIVRNY--GFVHLD--ATGDVNEAIKELNGMMVDGQPMKVQLSTS 262
E+ + QK+G V + + N+ G V + T + + A+K L+G +VDG+ + +L
Sbjct: 337 EMTQSCQKYGIVKKVVVYANHPDGVVSVTFPTTEESDMAVKYLHGRVVDGRKLTAELWDG 396
Query: 263 RVR 271
R +
Sbjct: 397 RTK 399
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -2
Query: 275 AAGRGSSTAAPSWVARPPSCHSTL*WPRSRHPSRPNVRSHSYARYRTRPPSRTSGTARGP 96
+A R ++ AP+ +RP + + PR+ PSR V + + ++ P+R AR
Sbjct: 264 SAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRATVLTKTAP--ASKAPTRAPVPARSA 321
Query: 95 PA 90
PA
Sbjct: 322 PA 323
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -2
Query: 275 AAGRGSSTAAPSWVARPPSCHSTL*WPRSRHPSRPNVRSHSYARYRTRPPSRTSGTARGP 96
+A R ++ AP+ +RP + + PR+ PSR V + + ++ P+R AR
Sbjct: 264 SAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRATVLTKTAP--ASKAPTRAPVPARSA 321
Query: 95 PA 90
PA
Sbjct: 322 PA 323
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -2
Query: 275 AAGRGSSTAAPSWVARPPSCHSTL*WPRSRHPSRPNVRSHSYARYRTRPPSRTSGTARGP 96
+A R ++ AP+ +RP + + PR+ PSR V + + ++ P+R AR
Sbjct: 264 SAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRATVLTKTAP--ASKAPTRAPVPARSA 321
Query: 95 PA 90
PA
Sbjct: 322 PA 323
>U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical
protein T27A3.4 protein.
Length = 203
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -2
Query: 194 RSRHPSRPNVRSHSYARYRTRPPSRTSGTARGPPARASCPLGYR 63
RSR SRP RS S + R+R SR S R +S G R
Sbjct: 131 RSRSRSRPRTRSGSRSSSRSRSGSRRSSRRRSRHRSSSKARGRR 174
Score = 26.2 bits (55), Expect = 4.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 197 PRSRHPSRPNVRSHSYARYRTRPPSRTSGTARGPPARAS 81
PR+R SR + RS S +R +R SR +++ RAS
Sbjct: 138 PRTRSGSRSSSRSRSGSRRSSRRRSRHRSSSKARGRRAS 176
Score = 25.4 bits (53), Expect = 7.6
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -2
Query: 269 GRGSSTAAPSWVARPPSCHSTL*WPRSRHPSRPNVRSHSYARYRTRPPSRTSGTARGPPA 90
GR S+ +RP + + RSR SR + R S R ++ R + TA+ PA
Sbjct: 124 GRSRSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRRRSRHRSSSKARGRRASTAKKTPA 183
Query: 89 R 87
+
Sbjct: 184 K 184
>U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical
protein C10G11.9 protein.
Length = 203
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -2
Query: 194 RSRHPSRPNVRSHSYARYRTRPPSRTSGTARGPPARASCPLGYR 63
RSR SRP RS S + R+R SR S R +S G R
Sbjct: 131 RSRSRSRPRTRSGSRSSSRSRSGSRRSSRRRSRRRSSSKARGRR 174
Score = 26.6 bits (56), Expect = 3.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 197 PRSRHPSRPNVRSHSYARYRTRPPSRTSGTARGPPARAS 81
PR+R SR + RS S +R +R SR +++ RAS
Sbjct: 138 PRTRSGSRSSSRSRSGSRRSSRRRSRRRSSSKARGRRAS 176
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -2
Query: 269 GRGSSTAAPSWVARPPSCHSTL*WPRSRHPSRPNVRSHSYARYRTRPPSRTSGTARGPPA 90
GR S+ +RP + + RSR SR + R S R ++ R + TA+ PA
Sbjct: 124 GRSRSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRRRSRRRSSSKARGRRASTAKKTPA 183
Query: 89 R 87
+
Sbjct: 184 K 184
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 27.5 bits (58), Expect = 1.9
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 194 RSRHPSRPNVRSHSYARYRTRPPSRTSGTA 105
+ +HP+RP+ S + + + RP +GT+
Sbjct: 17 QKKHPARPSTESSTSSSHHRRPAQEMNGTS 46
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 27.5 bits (58), Expect = 1.9
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 194 RSRHPSRPNVRSHSYARYRTRPPSRTSGTA 105
+ +HP+RP+ S + + + RP +GT+
Sbjct: 17 QKKHPARPSTESSTSSSHHRRPAQEMNGTS 46
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 27.5 bits (58), Expect = 1.9
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 194 RSRHPSRPNVRSHSYARYRTRPPSRTSGTA 105
+ +HP+RP+ S + + + RP +GT+
Sbjct: 17 QKKHPARPSTESSTSSSHHRRPAQEMNGTS 46
>U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defective
protein 1, isoformc protein.
Length = 721
Score = 27.5 bits (58), Expect = 1.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 158 HSYARYRTRPPSRTSGTARGPPAR 87
H Y R+ + P S TAR PP R
Sbjct: 47 HQYQRFASEPSDSVSRTARVPPPR 70
>U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defective
protein 1, isoformb protein.
Length = 942
Score = 27.5 bits (58), Expect = 1.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 158 HSYARYRTRPPSRTSGTARGPPAR 87
H Y R+ + P S TAR PP R
Sbjct: 245 HQYQRFASEPSDSVSRTARVPPPR 268
>U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defective
protein 1, isoforma protein.
Length = 987
Score = 27.5 bits (58), Expect = 1.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 158 HSYARYRTRPPSRTSGTARGPPAR 87
H Y R+ + P S TAR PP R
Sbjct: 313 HQYQRFASEPSDSVSRTARVPPPR 336
>AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity
specification proteinSYD-1 protein.
Length = 942
Score = 27.5 bits (58), Expect = 1.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 158 HSYARYRTRPPSRTSGTARGPPAR 87
H Y R+ + P S TAR PP R
Sbjct: 245 HQYQRFASEPSDSVSRTARVPPPR 268
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.1 bits (57), Expect = 2.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -2
Query: 188 RHPSRPNVRSHSYARYRTRPPSRTSGTA 105
+HP+RP+ S + + + RP +GT+
Sbjct: 67 KHPARPSTESSTSSSHHRRPAQEMNGTS 94
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.1 bits (57), Expect = 2.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -2
Query: 188 RHPSRPNVRSHSYARYRTRPPSRTSGTA 105
+HP+RP+ S + + + RP +GT+
Sbjct: 67 KHPARPSTESSTSSSHHRRPAQEMNGTS 94
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 27.1 bits (57), Expect = 2.5
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +2
Query: 14 RHEGRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVN 193
+ R + + +FVGN+ VR +F FGT+ +RN L A +
Sbjct: 131 KSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVR-MRNL----LPANEKLT 185
Query: 194 EAIKELNGMMVDGQ 235
+ + L G + D Q
Sbjct: 186 KRVTHLTGKLNDKQ 199
>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -1
Query: 255 DSCTFMGCPSTIMPF------NSLMASFTSPVASKCTKP*LRTISHSTTVPNFWNS 106
D C M ++P+ N+++ + VA KC K IS S +P+F N+
Sbjct: 680 DECVNMAITEMLVPYMRDELYNTILEEAKTAVAKKCRKEFASRISRSGYLPDFDNN 735
>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -1
Query: 255 DSCTFMGCPSTIMPF------NSLMASFTSPVASKCTKP*LRTISHSTTVPNFWNS 106
D C M ++P+ N+++ + VA KC K IS S +P+F N+
Sbjct: 680 DECVNMAITEMLVPYMRDELYNTILEEAKTAVAKKCRKEFASRISRSGYLPDFDNN 735
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 27.1 bits (57), Expect = 2.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -2
Query: 188 RHPSRPNVRSHSYARYRTRPPSRTSGTA 105
+HP+RP+ S + + + RP +GT+
Sbjct: 67 KHPARPSTESSTSSSHHQRPAQEMNGTS 94
>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
Length = 1521
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -1
Query: 255 DSCTFMGCPSTIMPF------NSLMASFTSPVASKCTKP*LRTISHSTTVPNFWNS 106
D C M ++P+ N+++ + VA KC K IS S +P+F N+
Sbjct: 680 DECVNMAITEMLVPYMRDELYNTILEEAKTAVAKKCRKEFASRISRSGYLPDFDNN 735
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 20 EGRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 130
E + A S K+FVG L ++R F++FG V
Sbjct: 100 EVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 20 EGRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 130
E + A S K+FVG L ++R F++FG V
Sbjct: 100 EVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +2
Query: 77 DKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNEAIKELN 214
D PE ++ + CDI R +H++ AIK LN
Sbjct: 337 DTASLPEETDVSGTIDLLKNCDIDRRSASIHVEQFSSTTAAIKNLN 382
>U50312-2|AAA92319.2| 477|Caenorhabditis elegans Hypothetical
protein B0222.2 protein.
Length = 477
Score = 26.6 bits (56), Expect = 3.3
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +2
Query: 26 RKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNEAIK 205
RK PS K +V L D+TR + R + + F T ++ GF H DV+ AI
Sbjct: 285 RKTPSGKIRKFYVWLLPDRTRV-DGRNITKLFST-IQVFTACFAGFAH--GANDVSNAIA 340
Query: 206 EL 211
L
Sbjct: 341 PL 342
>AL008868-1|CAA15515.2| 213|Caenorhabditis elegans Hypothetical
protein C53C7.3 protein.
Length = 213
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 182 PSRPNVRSHSYARYRTRPPSRTSGTARGPP 93
P RPN S SY +Y PP S R PP
Sbjct: 85 PIRPNNNS-SYRQYVPTPPPSLSHMMRSPP 113
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 26.6 bits (56), Expect = 3.3
Identities = 20/45 (44%), Positives = 22/45 (48%)
Frame = -2
Query: 194 RSRHPSRPNVRSHSYARYRTRPPSRTSGTARGPPARASCPLGYRR 60
RSR SR RS R R PP R+ G R PP R+ P RR
Sbjct: 101 RSRTRSRDRRRSPPRRRDRRTPPRRSPG-RRSPP-RSRLPGPERR 143
>U51999-8|AAA96090.2| 465|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 7 protein.
Length = 465
Score = 26.2 bits (55), Expect = 4.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 222 WWTGNP*RCSCRRAASGSD 278
WWT NP + SC ++ SD
Sbjct: 406 WWTDNPNKVSCPDSSDESD 424
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 26.2 bits (55), Expect = 4.4
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = -2
Query: 287 PCPVAAGRGSSTAAPSWVARPPSCHSTL*WPRSRHPSRPNVRSHSYARYRTRPPSRTSGT 108
P P +G+ PS + P P HPS P R H + R R P+R
Sbjct: 62 PAPRPSGQPPGPQGPSDLPGPSGAP-----PGPPHPSGPPHRPHPHPSRRPR-PTRLPRP 115
Query: 107 ARGPPARASCP 75
+R P + A P
Sbjct: 116 SRSPHSDAPEP 126
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Frame = +2
Query: 104 ELFQKFGTVVECDIVRNYG-------FVHLDATGDVNEAIKELNGMMVDGQPMKVQL 253
E+ +K+G V E ++ N G +V D +A +LN +GQP+ +L
Sbjct: 97 EMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNRWFNGQPIYAEL 153
>AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical
protein Y54E5A.4 protein.
Length = 538
Score = 26.2 bits (55), Expect = 4.4
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = -2
Query: 293 ARPCPVAAGRGSSTAAP---SWVARPPSCHSTL*WPRSRHPSRPNVRSHSYARYRTRPPS 123
A P P G+STAAP S L +S + P + + T P +
Sbjct: 99 AAPAPTGGLFGASTAAPATGSLFGSTAPATGGLFGAKSTTSAAPTLGGGLFGS-STAPAA 157
Query: 122 RTSGTARGPPARASCPLG 69
+ + PPA A+ PLG
Sbjct: 158 AATTSFGAPPATAAAPLG 175
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 26.2 bits (55), Expect = 4.4
Identities = 26/80 (32%), Positives = 32/80 (40%)
Frame = -1
Query: 291 SPMPGRCRTRLVDSCTFMGCPSTIMPFNSLMASFTSPVASKCTKP*LRTISHSTTVPNFW 112
S P V S T STI +S TS V S T TI+ STTVP
Sbjct: 195 STTPNPSSPSTVQSTTTAEPTSTITSTTVPESSTTSVVQSTTTAEPTSTIT-STTVPESS 253
Query: 111 NSSRTSGARVLSVRLPTNIL 52
S TS + +PT+ +
Sbjct: 254 TSLLTSTLASTTTLIPTSTM 273
>AF318611-1|AAK01099.1| 436|Caenorhabditis elegans ionotropic
glutamate receptor GLR-7 protein.
Length = 436
Score = 26.2 bits (55), Expect = 4.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 222 WWTGNP*RCSCRRAASGSD 278
WWT NP + SC ++ SD
Sbjct: 390 WWTDNPNKVSCPDSSDESD 408
>Z79754-1|CAB02090.1| 457|Caenorhabditis elegans Hypothetical
protein F25H2.1 protein.
Length = 457
Score = 25.8 bits (54), Expect = 5.8
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +2
Query: 125 TVVECDIVRNYGFVHLD 175
T++E ++V+NYG V +D
Sbjct: 57 TILEANLVKNYGLVRMD 73
>U80437-7|AAB37622.2| 295|Caenorhabditis elegans Nudix family
protein 7 protein.
Length = 295
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 8/44 (18%)
Frame = +2
Query: 23 GRKAPSTPTTKIFVGNLTDKT--------RAPEVRELFQKFGTV 130
G A P T +F G + DKT R VRELF++ G +
Sbjct: 32 GTTAKFMPNTMVFPGGVVDKTDAKLGDEFRIAAVRELFEESGVL 75
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -2
Query: 194 RSRHPSRPNVRSHSYARYRTRPPSRTSGTARGP--PARA 84
RSR SR R+ + AR RTR +++S T P P+R+
Sbjct: 364 RSRSRSRTPNRNWTRARSRTRSQAKSSSTLTWPLSPSRS 402
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 25.8 bits (54), Expect = 5.8
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 194 RSRHPSRPNVRSHSYARYRTRPPSRTSGTARGPP 93
RSR SR RS R RT+ SR+ PP
Sbjct: 1544 RSRSRSRERYRSRRDRRSRTKSRSRSRSREAAPP 1577
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 25.8 bits (54), Expect = 5.8
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 194 RSRHPSRPNVRSHSYARYRTRPPSRTSGTARGPP 93
RSR SR RS R RT+ SR+ PP
Sbjct: 169 RSRSRSRERYRSRRDRRSRTKSRSRSRSREAAPP 202
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 194 RSRHPSRPNVRSHSYARYRTRPPSRTSG 111
RSR PSR RS S + R++ P+ +G
Sbjct: 175 RSRSPSRSRSRSRSRSVSRSKSPASRNG 202
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 194 RSRHPSRPNVRSHSYARYRTRPPSRTSG 111
RSR PSR RS S + R++ P+ +G
Sbjct: 175 RSRSPSRSRSRSRSRSVSRSKSPASRNG 202
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 164 VHLDATGDVNEAI--KELNGMMVDGQPMKVQLSTSRVRQR 277
V L D++ A K+ G+ D QP+ V T+R+R+R
Sbjct: 1163 VKLSNDSDIDAAFIAKKCQGLTDDHQPVDVASRTTRMRER 1202
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 164 VHLDATGDVNEAI--KELNGMMVDGQPMKVQLSTSRVRQR 277
V L D++ A K+ G+ D QP+ V T+R+R+R
Sbjct: 1289 VKLSNDSDIDAAFIAKKCQGLTDDHQPVDVASRTTRMRER 1328
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 164 VHLDATGDVNEAI--KELNGMMVDGQPMKVQLSTSRVRQR 277
V L D++ A K+ G+ D QP+ V T+R+R+R
Sbjct: 1163 VKLSNDSDIDAAFIAKKCQGLTDDHQPVDVASRTTRMRER 1202
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 164 VHLDATGDVNEAI--KELNGMMVDGQPMKVQLSTSRVRQR 277
V L D++ A K+ G+ D QP+ V T+R+R+R
Sbjct: 1289 VKLSNDSDIDAAFIAKKCQGLTDDHQPVDVASRTTRMRER 1328
>L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protein
protein.
Length = 303
Score = 25.4 bits (53), Expect = 7.6
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = -1
Query: 225 TIMPFNSLMASFTSPVASKCTKP*LRTISHSTTVPNFWNSSRTSGARVLSVRLPTNILVV 46
T +PF +L S PV+S L+TI+ P S ++G +LS LP + +
Sbjct: 1 THLPFQTLPVSTPLPVSSSSLTDVLQTIAALQACPTSCIPSTSTG--MLSPNLPFSATIP 58
Query: 45 GVEGAFLPS 19
V F PS
Sbjct: 59 RV-NLFPPS 66
>L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeobox
protein 23 protein.
Length = 305
Score = 25.4 bits (53), Expect = 7.6
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = -1
Query: 225 TIMPFNSLMASFTSPVASKCTKP*LRTISHSTTVPNFWNSSRTSGARVLSVRLPTNILVV 46
T +PF +L S PV+S L+TI+ P S ++G +LS LP + +
Sbjct: 3 THLPFQTLPVSTPLPVSSSSLTDVLQTIAALQACPTSCIPSTSTG--MLSPNLPFSATIP 60
Query: 45 GVEGAFLPS 19
V F PS
Sbjct: 61 RV-NLFPPS 68
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 25.4 bits (53), Expect = 7.6
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = -2
Query: 287 PCPVAAGRGSSTAAPSWVARPPSCHSTL*WPRSRHPSRPNVRSHSYARYR-TRPPSRTSG 111
P P +GS A S PP + PR+ P P S + PP R
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 110 TARGPPARASCPLG 69
PP R S P G
Sbjct: 297 PPPPPPPRGSPPTG 310
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 25.4 bits (53), Expect = 7.6
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = -2
Query: 287 PCPVAAGRGSSTAAPSWVARPPSCHSTL*WPRSRHPSRPNVRSHSYARYR-TRPPSRTSG 111
P P +GS A S PP + PR+ P P S + PP R
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 110 TARGPPARASCPLG 69
PP R S P G
Sbjct: 318 PPPPPPPRGSPPTG 331
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 25.4 bits (53), Expect = 7.6
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = -2
Query: 287 PCPVAAGRGSSTAAPSWVARPPSCHSTL*WPRSRHPSRPNVRSHSYARYR-TRPPSRTSG 111
P P +GS A S PP + PR+ P P S + PP R
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 110 TARGPPARASCPLG 69
PP R S P G
Sbjct: 303 PPPPPPPRGSPPTG 316
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 25.4 bits (53), Expect = 7.6
Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
Frame = -2
Query: 188 RHPSRPNVR--SHSYARYRTRPPSRTSGTARGPPAR-----ASCPLGYRRIF*WSASRAP 30
R PS P R S S R PP R +R PP R S P RR SR+
Sbjct: 113 RSPSPPRRRRISRSPVRRSRSPPRRQVSRSRSPPPRRQQRSRSPPPAKRR---RDQSRSK 169
Query: 29 SCPRAEFLQ 3
S PR + Q
Sbjct: 170 SPPRRNYRQ 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,351,016
Number of Sequences: 27780
Number of extensions: 152570
Number of successful extensions: 784
Number of sequences better than 10.0: 141
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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