Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_K09
         (173 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   0.57 
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    21   5.3  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    21   7.0  
AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative apyrase/n...    20   9.2  
AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5' nucleo...    20   9.2  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    20   9.2  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 159 TPRSLETSIFKNCILRTAHGDKCVRQTL 76
           T ++L T+    C++R   G KC ++ L
Sbjct: 772 TTKALRTAKALGCLMRNHSGPKCAKRRL 799


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 25  RSEASRQIRPYRCSAS 72
           +S    Q++PYRC  S
Sbjct: 85  KSHGVNQLKPYRCLQS 100


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 50  DPIGAVHQRRVWRTHLSPCA 109
           DP+GA       RT L+PC+
Sbjct: 61  DPLGARATSVDCRTSLAPCS 80


>AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 566

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 83  WRTHLSPCAVRSMQFLKILVSR 148
           WRT +   AVR +   ++ +S+
Sbjct: 349 WRTQVDALAVRPVGVSRVFLSK 370


>AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 566

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 83  WRTHLSPCAVRSMQFLKILVSR 148
           WRT +   AVR +   ++ +S+
Sbjct: 349 WRTQVDALAVRPVGVSRVFLSK 370


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 168  MVLTPRSLETSIFKNCILRTAHGDKC 91
            + +  R + T  ++ CILR    D+C
Sbjct: 992  VAIQDRVIATWNYRRCILREDVEDRC 1017


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.125    0.355 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,752
Number of Sequences: 2352
Number of extensions: 3179
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 36
effective length of database: 479,307
effective search space used: 10065447
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)