Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_K09
         (173 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   0.59 
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   1.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   1.8  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    20   2.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   2.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    20   3.2  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    19   5.5  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    19   5.5  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    19   5.5  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     18   9.6  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    18   9.6  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    18   9.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    18   9.6  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    18   9.6  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    18   9.6  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    18   9.6  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 0.59
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 7   PAQAGGRSEASRQIRPYRCSASTKSLANTFV 99
           P   GGR++ + ++    CS   K + NT V
Sbjct: 341 PHMLGGRTDTTYRVVCDACSMGVKYIPNTEV 371



 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +3

Query: 78  ESGEHICRRVPCEVCSS 128
           E+G H C   P    SS
Sbjct: 273 EAGSHSCEACPAHSKSS 289


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = -1

Query: 113 ARHTATNVFARLFVDALHL*GLIWRDASDLPPAWAG 6
           AR     V  ++  D LHL    W     L P W G
Sbjct: 18  ARFNNQTVVDKVPPDMLHLIDANWYQYPPLNPMWHG 53


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 141  TSIFKNCILRTAHGDKCVR 85
            TSI K+C+     G+K +R
Sbjct: 1304 TSIIKDCVEDMKRGNKILR 1322


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +3

Query: 36  VSPNQTL*VQCINEESGEHICRRV 107
           V+P  ++   C       HICR++
Sbjct: 22  VTPTMSIKCNCKRHVIKPHICRKI 45


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 44  KSDPIGAVHQRRVWRTHLSP 103
           KS+PI A    ++ +  LSP
Sbjct: 257 KSEPIDAYEMHQISKKKLSP 276


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 160 HSEIP*DQYLQELHTSHGT 104
           H  +  DQ++Q LH    T
Sbjct: 557 HLFVELDQFIQNLHAGENT 575


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 25  RSEASRQIRPYRCSASTKSLA 87
           RS       PYRC+   K+ A
Sbjct: 82  RSHGKEGEDPYRCNICGKTFA 102


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 107 HTATNVFARLFVDALHL*GLI 45
           HTATN F      A  L GL+
Sbjct: 77  HTATNYFVTSLAFADCLVGLV 97


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +2

Query: 53  PIGAVHQRRVWR 88
           P+  + +RR+WR
Sbjct: 104 PLEKLKERRIWR 115


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 5/7 (71%), Positives = 5/7 (71%)
 Frame = -1

Query: 26  LPPAWAG 6
           LPP W G
Sbjct: 224 LPPVWVG 230


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = +1

Query: 58  RCSASTKSLANTFVAVCRAKY 120
           RC++    +ANT +   +  Y
Sbjct: 67  RCTSRQIGIANTLIPFMQQNY 87


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 139 QYLQELHTSHGT 104
           +YLQELH    T
Sbjct: 328 RYLQELHVDAPT 339


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 10  AQAGGRSEASRQIRPYRCSAST 75
           AQ GG  +  R+   Y  +AST
Sbjct: 476 AQLGGERQNGRKDSGYDGAAST 497


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = -3

Query: 135 IFKNCILRTAHGDKCV 88
           I + C+ + A  D+C+
Sbjct: 95  IIEQCVSKAADEDECM 110


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = -3

Query: 135 IFKNCILRTAHGDKCV 88
           I + C+ + A  D+C+
Sbjct: 95  IIEQCVSKAADEDECM 110


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 105 HGDKCVRQTLR 73
           HGD   +QT+R
Sbjct: 280 HGDHAPKQTVR 290


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.125    0.355 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,961
Number of Sequences: 438
Number of extensions: 811
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 37
effective length of database: 130,137
effective search space used:  2602740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)