Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_K07
         (145 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   1.0  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    20   3.1  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               19   4.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          19   5.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      19   5.4  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 42 SLFWYIIFTSSYLYRPLS 95
          SL+WY+I   + +Y  +S
Sbjct: 10 SLYWYLILQIALVYGEIS 27


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 45  LFWYIIFTSSYLYRPLSLIYFLS 113
           +F   IFT SY    + +IY+ S
Sbjct: 210 IFVATIFTFSYCIPMILIIYYYS 232


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 36 NYSLFWYIIFTSSYLY 83
          NY  F+ ++ T  +LY
Sbjct: 4  NYHFFFILVITLIFLY 19


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 98  DIFFEQLSTSLS 133
           +IF+E++ TSL+
Sbjct: 575 EIFYEKIETSLN 586


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 98  DIFFEQLSTSLS 133
           +IF+E++ TSL+
Sbjct: 575 EIFYEKIETSLN 586


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,407
Number of Sequences: 438
Number of extensions: 449
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 28
effective length of database: 134,079
effective search space used:  2547501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)