Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_K04
         (169 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   3.1  
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    21   7.1  
AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14...    20   9.3  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    20   9.3  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 64  CRKT*DGLRSPISSLVPKSC 5
           C KT  G R P  ++ P  C
Sbjct: 568 CHKTCVGCRGPRDTIAPDGC 587


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 99  HLVHWDQ 79
           HLVHW+Q
Sbjct: 120 HLVHWNQ 126


>AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14A
           protein.
          Length = 365

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 2   AAGFRHEGRYRRS 40
           A GF H GR R S
Sbjct: 260 AVGFGHTGRQRHS 272


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 33  GDRKPSQVLRHLQSL 77
           G+R P Q +RH Q+L
Sbjct: 60  GNRLPIQRIRHRQTL 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,930
Number of Sequences: 2352
Number of extensions: 2979
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 34
effective length of database: 484,011
effective search space used: 10164231
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)