Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_K04
         (169 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   0.60 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   0.60 
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    21   1.0  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    21   1.0  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    20   3.2  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    20   3.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    19   4.2  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           19   4.2  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     19   4.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           19   4.2  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     19   5.6  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    19   7.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    19   7.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          18   9.7  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 0.60
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -2

Query: 159  TLQLPVCESVIGLTIMIARSHLVHW--DQQGSASV 61
            T+Q+P    V+ +T   + S L+HW     G AS+
Sbjct: 1400 TVQVPPSAPVLYVTSSTSSSILLHWKSGHNGGASL 1434


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 0.60
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -2

Query: 159  TLQLPVCESVIGLTIMIARSHLVHW--DQQGSASV 61
            T+Q+P    V+ +T   + S L+HW     G AS+
Sbjct: 1396 TVQVPPSAPVLYVTSSTSSSILLHWKSGHNGGASL 1430


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = +1

Query: 31  SAIANRLRFYDTCRALLVPVYQMTSCDHYGQAD 129
           + +  R+         + PVY+M    H G AD
Sbjct: 71  ACVMKRIEMLKGTELYVEPVYKMIEVVHAGNAD 103


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = +1

Query: 31  SAIANRLRFYDTCRALLVPVYQMTSCDHYGQAD 129
           + +  R+         + PVY+M    H G AD
Sbjct: 71  ACVMKRIEMLKGTELYVEPVYKMIEVVHAGNAD 103


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 101 VIWYTGTSKALQVS*NL 51
           VIW   TSK+L+   N+
Sbjct: 78  VIWIFSTSKSLRTPSNM 94


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 101 VIWYTGTSKALQVS*NL 51
           VIW   TSK+L+   N+
Sbjct: 78  VIWIFSTSKSLRTPSNM 94


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 16  ARGKISAIANRLRFY 60
           AR  +  +AN +RFY
Sbjct: 278 ARAIVETLANFMRFY 292


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 16  ARGKISAIANRLRFY 60
           AR  +  +AN +RFY
Sbjct: 149 ARAIVETLANFMRFY 163


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -2

Query: 120 TIMIARSHLVHWDQQGSASVVKPETVC 40
           T+ I  + ++    QG+ +++  +TVC
Sbjct: 203 TVFILNNEIIR-SIQGTGTIILKKTVC 228


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 16  ARGKISAIANRLRFY 60
           AR  +  +AN +RFY
Sbjct: 278 ARAIVETLANFMRFY 292


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 21  REDIGDRKPSQVLRHLQSLA 80
           R+ I + + + VLRH+Q+ A
Sbjct: 337 RQKINNSQNALVLRHVQAEA 356


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +3

Query: 51  QVLRHLQSLAGPSVPDDFVRSLWSSRLPTHIQVI 152
           + ++ LQS A   +     R +WSS++   + V+
Sbjct: 53  EAIQCLQSSAFKEIKTLPDRGMWSSKIEFILSVV 86


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -1

Query: 133 GNRLDHND 110
           GN  DHND
Sbjct: 270 GNESDHND 277


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 14  RHEGRYRRSQT 46
           RH  RY+R +T
Sbjct: 154 RHHPRYKRPRT 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,949
Number of Sequences: 438
Number of extensions: 733
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 35
effective length of database: 131,013
effective search space used:  2620260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)