Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_K03
(290 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 58 3e-10
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 31 0.034
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 27 0.56
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 26 0.97
SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|... 25 2.2
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 25 3.0
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 25 3.0
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 24 3.9
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 24 5.2
SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subu... 24 5.2
SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces pom... 24 5.2
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 24 5.2
SPBP35G2.04c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 24 5.2
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 23 6.9
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 23 6.9
SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po... 23 6.9
SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce... 23 9.1
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 23 9.1
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 23 9.1
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 23 9.1
SPBC4.03c |||COPII-coated vesicle component Sfb3 |Schizosaccharo... 23 9.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 23 9.1
SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|... 23 9.1
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 57.6 bits (133), Expect = 3e-10
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Frame = +1
Query: 28 VVSKLNQDKTATVGS------IIGKLGWAGVWKGLGPMIVMIGTLTALQWFIYDAVNVWL 189
+VSKLN +K A G+ I ++G++G+W GLG IVMIGTLT QW IYD+ +
Sbjct: 245 MVSKLNSNKKAGEGAGAAAARIYKEIGFSGLWNGLGVRIVMIGTLTGAQWLIYDSFKIMC 304
Query: 190 RMP 198
P
Sbjct: 305 GFP 307
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 31.1 bits (67), Expect = 0.034
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 88 GWAGVWKGLGPMIVMIGTLTALQWFIYDAVNVWL 189
G+ G++KGL P ++ + A+ + +Y+ WL
Sbjct: 390 GFRGLYKGLSPNLLKVAPSVAISYLVYENCKKWL 423
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.1 bits (57), Expect = 0.56
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 10 YSARGSVVSKLNQDKTATVGSIIGKLGWAGVWKGLGPMIVMIGTLTALQWFIYDAV 177
YS G + + +++ +I G AG+++G+GPM M+G L + W IY V
Sbjct: 40 YSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPM--MLGYLPS--WSIYFVV 91
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 26.2 bits (55), Expect = 0.97
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 152 SAVRVPIITIIGPRPFQTPAQPSLPIIDPTVAV 54
+A P+I + P T PSLP++D V
Sbjct: 169 AAKAAPVIHVYEPDAIVTTTDPSLPLLDSNAVV 201
>SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 574
Score = 25.0 bits (52), Expect = 2.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 136 GTLTALQWFIYDAVNVWLRMPRAPPPTMP 222
G LT L F Y + VW P PP T P
Sbjct: 149 GFLT-LALFTYSFLMVWRTNPNIPPATSP 176
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 24.6 bits (51), Expect = 3.0
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 125 IIGPRPFQTPAQPSL 81
I+G P QTPA+PSL
Sbjct: 271 IVGNAPQQTPARPSL 285
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 24.6 bits (51), Expect = 3.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 88 GWAGVWKGLGPMIVMIGTLTALQWFIYDAV 177
G G+++G GP +V I L + +YD +
Sbjct: 190 GLRGLYRGFGPSVVGIVVYRGLYFGMYDTL 219
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 24.2 bits (50), Expect = 3.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 88 GWAGVWKGLGPMIVMIGTLTALQWFIYDA 174
G +KG+ P +V+ TA+ W Y+A
Sbjct: 261 GIPSFFKGIRPRMVVAMPATAVSWAAYEA 289
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 23.8 bits (49), Expect = 5.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 162 EPLQRCESTDHHDHRAQTLPDSGPTE 85
E L +ST + HR +++P PTE
Sbjct: 662 ESLPSQQSTVSNHHRKESIPSKQPTE 687
>SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1405
Score = 23.8 bits (49), Expect = 5.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 1 CCNYSARGSVVSKLNQDK 54
CCN S RGSV + N ++
Sbjct: 1335 CCNKSCRGSVHFEYNDEQ 1352
>SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1185
Score = 23.8 bits (49), Expect = 5.2
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 165 LRCRQCVAEDAPGSAPDYARVDA-QAARGRGSRQD 266
++CR + G APD +++ ++A G G R D
Sbjct: 372 IQCRVTTEDPNNGFAPDIGKIEVYRSAGGNGVRLD 406
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 23.8 bits (49), Expect = 5.2
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 120 RAQTLP-DSGPTELANYRPNGRSLVL 46
R+ +P DSGP PNGR LV+
Sbjct: 434 RSLKMPLDSGPVSNVYSMPNGRHLVI 459
>SPBP35G2.04c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 23.8 bits (49), Expect = 5.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 150 AAVVHLRCRQCVAEDAPGSAPDYAR 224
A + H R QC+ +++ G A D AR
Sbjct: 86 ALLSHARNIQCLIQESDGDAKDVAR 110
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 23.4 bits (48), Expect = 6.9
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +1
Query: 61 TVGSIIGKLGWAGVWKGLGPMIVMIGTLTALQWFIYDAV 177
T+ SI+ G+ ++KG+ P ++ + A+ YD +
Sbjct: 298 TIKSIVAHEGFLALYKGIVPRVLWLSGGGAIFLGCYDVI 336
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 23.4 bits (48), Expect = 6.9
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 52 KTATVGSIIGKLGWAGVWKGLGPMIVMIGTLTALQWFI 165
K +V + KLGWAG+ ++ I L W +
Sbjct: 254 KGQSVMHSVAKLGWAGLCSKFCEIVSSIPDSEPLNWML 291
>SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1564
Score = 23.4 bits (48), Expect = 6.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3
Query: 273 LICLAGFLGLEP 238
LICL GFL L+P
Sbjct: 859 LICLRGFLNLKP 870
>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 459
Score = 23.0 bits (47), Expect = 9.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +3
Query: 33 LQTKPGQDCDRW 68
++ KPG+D DRW
Sbjct: 190 IEMKPGRDGDRW 201
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +1
Query: 91 WAGVWKGLGPMIVMIGTLTALQWFIYDAVNV 183
W G K + P+ + + A F++ VNV
Sbjct: 30 WCGPCKAISPLFSQLASKYASPKFVFAKVNV 60
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 23.0 bits (47), Expect = 9.1
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 19 RGSVVSKLNQDKTATVGSIIGKLGWAGVWKGLGPMIVMIGTL 144
R + ++K +QD T +G+L W + LG GT+
Sbjct: 248 RPAKITKPSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTI 289
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 23.0 bits (47), Expect = 9.1
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = -3
Query: 192 PQPHIDGIVDEPLQRCESTDHHDHRAQT 109
P+ H++ ++EP+ R +S +H++ T
Sbjct: 172 PELHVNSKIEEPIHRIDS-EHNEPEYHT 198
>SPBC4.03c |||COPII-coated vesicle component Sfb3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -1
Query: 155 CSAVRVPIITIIGPRPFQTPAQPSLPIIDPT 63
C+A +P+ I+ P P + +P++D T
Sbjct: 179 CNASGIPLGMIVQPFAELRPDEAPVPVVDNT 209
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 23.0 bits (47), Expect = 9.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 236 SGSRPRKPARQINQLHT 286
SGS +KP ++ +LHT
Sbjct: 315 SGSPSKKPVSELEELHT 331
>SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 23.0 bits (47), Expect = 9.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -3
Query: 108 LPDSGPTELANYRPNGRSLVLV*FGDDAASC 16
LP T LA PNG L+L G D +SC
Sbjct: 45 LPILPTTVLALLFPNGFHLLLKHEGGDVSSC 75
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,288,765
Number of Sequences: 5004
Number of extensions: 25149
Number of successful extensions: 95
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 69775820
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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