Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_J24
(328 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0804 + 6038640-6040262 29 0.65
02_05_0819 - 32014236-32016059 29 0.65
07_03_0544 + 19309026-19310105 29 0.86
06_02_0055 + 10986228-10986388,10986717-10986899,10987013-10987652 29 0.86
02_05_0067 + 25557975-25558553 29 1.1
05_06_0078 - 25412770-25413852 28 1.5
05_03_0202 - 9874205-9874762 28 1.5
04_01_0209 + 2603411-2603538,2603580-2604096 28 1.5
03_06_0554 + 34691050-34691242,34691327-34691394,34691754-34692275 28 1.5
02_05_0374 + 28381456-28381785,28382302-28382555,28382665-283827... 28 1.5
01_07_0344 - 42869465-42869502,42869597-42869771,42869923-428701... 28 1.5
10_08_0218 - 15967064-15967906 28 2.0
05_05_0054 - 21936875-21937346,21937452-21937927 28 2.0
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 28 2.0
03_06_0084 + 31536286-31536718,31536907-31536983,31537380-315374... 28 2.0
02_05_0157 - 26353971-26354336,26354645-26354726,26354838-263549... 28 2.0
12_02_0132 - 14054331-14054969 27 2.6
10_01_0129 + 1535823-1537196 27 2.6
08_01_1038 + 10540185-10540709 27 2.6
07_03_0560 + 19479597-19480667 27 2.6
07_01_0050 - 402808-402819,402920-402922,402999-403010,403832-40... 27 2.6
06_03_1296 - 29104857-29105870 27 2.6
06_01_0096 - 794148-794246,795682-796975,798960-799417 27 2.6
02_05_0460 - 29224525-29224620,29225525-29226625 27 2.6
02_01_0158 - 1103461-1104186 27 2.6
07_03_0177 - 14770777-14772045 27 3.5
06_03_0757 + 24267599-24268882 27 3.5
01_06_1304 + 36140348-36140480,36141617-36141663 27 3.5
10_08_0581 + 18930601-18930777,18930856-18930965,18931037-189313... 27 4.6
10_01_0198 - 2158139-2158334,2158517-2158641,2158736-2158789,215... 27 4.6
08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831 27 4.6
06_01_0622 - 4527710-4528266,4528302-4528303,4535590-4535777 27 4.6
05_05_0332 - 24145999-24146052,24146749-24147117,24147158-24147598 27 4.6
03_06_0244 + 32613914-32614666 27 4.6
01_06_1782 - 39842133-39842160,39842531-39842657,39842980-39844675 27 4.6
10_05_0019 - 8049145-8049334,8059808-8060618,8060708-8060783,806... 26 6.1
06_02_0122 - 12095385-12095713,12096018-12096120 26 6.1
01_06_1172 - 35115248-35115874 26 6.1
01_06_0176 - 27233553-27234588,27235629-27235768 26 6.1
01_03_0140 - 12979580-12980158,12980297-12980479,12980721-129809... 26 6.1
01_01_0658 - 5017219-5018066,5018572-5019085 26 6.1
12_02_0768 - 22988119-22988223,22988337-22988558,22988645-229888... 26 8.0
08_02_1621 - 28304013-28304582 26 8.0
07_03_0623 - 20033815-20034009,20034308-20034415,20034416-200344... 26 8.0
06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,376... 26 8.0
04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965... 26 8.0
03_06_0572 + 34812203-34812278,34812485-34813768,34813973-348140... 26 8.0
03_02_0382 - 7958634-7959272,7959358-7959583,7959725-7959810,795... 26 8.0
03_02_0024 + 5079690-5081351 26 8.0
03_01_0368 + 2860640-2860855,2860959-2862203 26 8.0
02_05_0258 + 27222058-27223198,27223297-27223460,27224399-272245... 26 8.0
>06_01_0804 + 6038640-6040262
Length = 540
Score = 29.5 bits (63), Expect = 0.65
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 72 RSVRAT--VPAYGNAGGGAPRGRELAGGMGPAGRVY*RNYGLPXGRR 206
RS RA VP YG APR +E G G V+ Y L GRR
Sbjct: 40 RSSRAVNPVPPYGRRSALAPRRKEDFGDGGAFPEVHVAQYPLDMGRR 86
>02_05_0819 - 32014236-32016059
Length = 607
Score = 29.5 bits (63), Expect = 0.65
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 90 VPAYGNAGGGAPRGRELAGGMGPAGRVY*RNYGLPXGRR 206
VP YG GG PR E G G ++ Y L GRR
Sbjct: 54 VPPYGKRGGFVPRRPEDFGDGGAFPEIHVAQYPLGMGRR 92
>07_03_0544 + 19309026-19310105
Length = 359
Score = 29.1 bits (62), Expect = 0.86
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +3
Query: 84 ATVPAYGNAGGGAPRGRELAGGMGPAGRVY*RNYGLPXGRRRSLPIFKTQRDTEQNTSIA 263
AT A G GGG GR +GG G G G P R +L + R NT
Sbjct: 8 ATAAAGGGGGGGVAAGR--SGGGGGGGAAAAAGAGAPDPRAEAL---RCPRCDSANTKFC 62
Query: 264 LPDNQIFCK-RHFVR 305
+N + RHF +
Sbjct: 63 YYNNYSLSQPRHFCK 77
>06_02_0055 + 10986228-10986388,10986717-10986899,10987013-10987652
Length = 327
Score = 29.1 bits (62), Expect = 0.86
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 57 GSLRQRSVRATVPAYGNAGGGAPRGRELAGGMGPAG 164
G R+R RAT G+ GGG G +GG G G
Sbjct: 262 GRQRRRWARATSAVLGDGGGGGLGGGGSSGGEGGGG 297
>02_05_0067 + 25557975-25558553
Length = 192
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 78 VRATVPAYGNAGGGAPRGRELAGGMGPAG 164
V ++P A RGRELAGG P+G
Sbjct: 16 VLVSLPGLSRGDVDARRGRELAGGCNPSG 44
>05_06_0078 - 25412770-25413852
Length = 360
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 102 GNAGGGAPRGRELAGGMGPAG 164
G GGGA G ++AGG G AG
Sbjct: 96 GTVGGGAGEGGDVAGGSGFAG 116
>05_03_0202 - 9874205-9874762
Length = 185
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 81 RATVPAYGNAGGGAPRGRE--LAG-GMGPAGRV 170
R TV A AGGG RGRE AG G+G GR+
Sbjct: 147 RRTVEAAQAAGGGRRRGRERRAAGRGLGTTGRL 179
>04_01_0209 + 2603411-2603538,2603580-2604096
Length = 214
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 81 RATVPAYGNAGGGAPRGRE--LAG-GMGPAGRV 170
R TV A AGGG RGRE AG G+G GR+
Sbjct: 176 RRTVEAAQAAGGGRRRGRERRAAGRGLGTTGRL 208
>03_06_0554 + 34691050-34691242,34691327-34691394,34691754-34692275
Length = 260
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = +3
Query: 36 CAAEHLYGSLRQRSVRATVPAYGNAGGGAPRGRELAGGMG 155
CAA H R R+ R T PA A GGA G+ GG G
Sbjct: 110 CAACH--DRFRHRAERRT-PAAATATGGAQHGKHRGGGGG 146
>02_05_0374 +
28381456-28381785,28382302-28382555,28382665-28382773,
28383272-28383410,28383525-28383582,28384179-28384196,
28384301-28384423,28384483-28384681,28384763-28384796,
28385044-28385153
Length = 457
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 58 GAYDRDPYAQQYQPMGTLGAERRAVENSPEGWVPRE 165
G DRDP+ +G L E R ++N P VP+E
Sbjct: 11 GGLDRDPFVSL---LGKLIGESRRLQNDPPALVPQE 43
>01_07_0344 -
42869465-42869502,42869597-42869771,42869923-42870117,
42870678-42870788,42870899-42871111,42871551-42871658,
42871732-42871873,42872150-42873449,42874032-42874085,
42874491-42874923
Length = 922
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = +3
Query: 111 GGGAPRGRELAGGMGPAGRVY*RNYGLPXGRRRSLPIFKT 230
GGG RG AGGMGP + GL GR+ S F T
Sbjct: 110 GGGGGRGGGGAGGMGPGDGLI-GMPGLEIGRQNSFSGFGT 148
>10_08_0218 - 15967064-15967906
Length = 280
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 99 YGNAGGGAPRGRELAGGMGPAGRVY 173
YG +G G+ G AGG GP G Y
Sbjct: 241 YGGSGSGSGSGSGQAGGYGPYGGGY 265
>05_05_0054 - 21936875-21937346,21937452-21937927
Length = 315
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 93 PAYGNAGGGAPRGREL--AGGMGPAGRVY*RNYGLPXGRRRSLP 218
P YG AGGG G L GG PAG + R+ + G+R P
Sbjct: 100 PHYGAAGGGGGSGFTLDWDGGDDPAGLGFKRSCYMVGGKRARGP 143
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +3
Query: 99 YGNAGGGAPRGRELAGGMGPAGRVY*RNYGLPXGR 203
YG AGGG GR GG GP G R Y GR
Sbjct: 32 YGGAGGGGVGGR---GGRGPPGGGGGRGYEPGGGR 63
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 102 GNAGGGAPRGRELAGGMGPAG 164
G GG RG E GG GP G
Sbjct: 90 GRGYGGGGRGYESGGGRGPGG 110
>03_06_0084 +
31536286-31536718,31536907-31536983,31537380-31537428,
31537778-31538048,31540876-31541104,31541511-31541750
Length = 432
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 87 TVPAYGNAGGGAPRGREL-AGGMGPAGRVY*RNYGLPXGRRRSL 215
T PA+ +AGGG L G P R R LP G +RS+
Sbjct: 75 TTPAHADAGGGRHGDHHLQPQGCAPFKRAAARASQLPAGSKRSV 118
>02_05_0157 -
26353971-26354336,26354645-26354726,26354838-26354933,
26355365-26356068
Length = 415
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 78 VRATVPAYGNAGGGAPRGRELAGGMGPAG 164
V ATV A G GA G +AGG G AG
Sbjct: 57 VGATVGAVDGVGAGASAGGGVAGGGGVAG 85
>12_02_0132 - 14054331-14054969
Length = 212
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +3
Query: 57 GSLRQRSVRATVPA--YGNAGGGAPRGRELAGGMGPAGR 167
G LRQ V A +PA Y GGA + A +G R
Sbjct: 126 GGLRQEDVEAAIPAFEYSKGSGGAAEAEQCAVCIGVVRR 164
>10_01_0129 + 1535823-1537196
Length = 457
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 72 RSVRATVPAYGNAGGGAPRGRELAGG 149
RS R G GGGAPRG GG
Sbjct: 4 RSGRRLAAGGGGGGGGAPRGSPPGGG 29
>08_01_1038 + 10540185-10540709
Length = 174
Score = 27.5 bits (58), Expect = 2.6
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 66 RQRSVRATVPAYGNAGGGAPRGRELAGGMGPAGR--VY*RNYGLPXGRRRSL 215
R+ R T G G G G L GG G G+ V GL GRRRS+
Sbjct: 8 RRSRARWTASPVGGGGVGLGGGSGLGGGGGGLGKGGVRGGGGGLGGGRRRSV 59
>07_03_0560 + 19479597-19480667
Length = 356
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 102 GNAGGGAPRGRELAGGMGPAGRVY*RNYGLPXG 200
G AGGG G L GG+G G + +G+ G
Sbjct: 302 GGAGGGLGHGGGLGGGLGHGGGLGGGGFGVGVG 334
>07_01_0050 -
402808-402819,402920-402922,402999-403010,403832-404467
Length = 220
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 212 TSPSSXRKSVVALVHPSRGTHPSGEFSTARRSAPSVPIGW 93
T+P++ A V P G SG STA+ A +GW
Sbjct: 173 TTPNATTIDASAPVSPLDGGGSSGSTSTAKSGAAGRQVGW 212
>06_03_1296 - 29104857-29105870
Length = 337
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 206 PSSXRKSVVALVHPSRGTH 150
P S + +V LVHPS GTH
Sbjct: 69 PLSFQDQIVFLVHPSTGTH 87
>06_01_0096 - 794148-794246,795682-796975,798960-799417
Length = 616
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 81 RATVPAYGNAGGGAPRGRELAGGMGPAG 164
+A VP G GGG G GG G AG
Sbjct: 31 KAAVPKNGGNGGGGKNGGGNGGGNGGAG 58
>02_05_0460 - 29224525-29224620,29225525-29226625
Length = 398
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 30 HPCAAEHLYGSLRQRSVRATVPAYGNAGGGAPRGRELAGGMGPAGR 167
H A + G + +T+ G GGG PRG E A G P R
Sbjct: 118 HEPARNGVLGGVAGAHAASTLALVGGGGGG-PRGGEGAAGEAPTWR 162
>02_01_0158 - 1103461-1104186
Length = 241
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3
Query: 96 AYGNAGGGAPRGRELAGGMGPAGRVY*RNYGLPXGRRRS 212
A G GGG G GG G GR Y ++G G RRS
Sbjct: 82 AGGGGGGGGGFGSRGGGGSGGGGRSYGGSWG---GGRRS 117
>07_03_0177 - 14770777-14772045
Length = 422
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 108 AGGGAPRGRELAGGMGPA-GRVY*RNYGLPXG 200
AGGG +G L GG+GP G Y + GL G
Sbjct: 147 AGGGFGKGGGLGGGIGPGIGGGYGKGGGLGGG 178
>06_03_0757 + 24267599-24268882
Length = 427
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 57 GSLRQRSVRATVPAYGNAGGGAPRGRELAGG 149
GS R T P G GGG P G+ GG
Sbjct: 254 GSGSGGGARQTFPGGGTGGGGFPAGQARTGG 284
>01_06_1304 + 36140348-36140480,36141617-36141663
Length = 59
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 72 RSVRATVPAYGNAGGGAPRGRELAG 146
R T A G A GGA RGRE G
Sbjct: 8 REAAETTGAAGGAEGGAERGREAVG 32
>10_08_0581 +
18930601-18930777,18930856-18930965,18931037-18931307,
18931403-18931541,18932410-18932630,18932723-18932769,
18933390-18933755,18934049-18934127,18934697-18934890,
18935305-18935422
Length = 573
Score = 26.6 bits (56), Expect = 4.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 237 DTEQNTSIALPDNQIFC 287
DT T +A+PDN +FC
Sbjct: 514 DTGNKTEMAIPDNALFC 530
>10_01_0198 -
2158139-2158334,2158517-2158641,2158736-2158789,
2159038-2159342,2159677-2159860,2159908-2159999,
2161777-2161885
Length = 354
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 105 NAGGGAPRGRELAGGMGPAGRV 170
+ GGG+ GR+L GG P G+V
Sbjct: 7 SGGGGSGGGRDLNGGGTPCGQV 28
>08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831
Length = 757
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 209 SPSSXRKSVVALVHPSRGTHPS 144
S SS S A+VHP+ +HPS
Sbjct: 64 SSSSTNTSGAAIVHPTTSSHPS 85
>06_01_0622 - 4527710-4528266,4528302-4528303,4535590-4535777
Length = 248
Score = 26.6 bits (56), Expect = 4.6
Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 5/107 (4%)
Frame = +3
Query: 18 TADAHPCAAEHLYGSLRQRSVRATVPAYGNAGGGAPRGRELAGGMGPAGRVY*RNYGLPX 197
TA A P A+H + + + GG+P P GR Y N G P
Sbjct: 119 TATAPPFGADHTSAKAALTGILTAIFSSARRAGGSP----------PHGRRY--NAGAPT 166
Query: 198 GRRRSLPIFKTQRDTEQNTS-----IALPDNQIFCKRHFVRNTRTLR 323
GRR +R + ++S IA+P F VR TRT R
Sbjct: 167 GRRLDRRRLAGRRSSSSSSSGEVLRIAVPRKTGFQAFVDVRITRTPR 213
>05_05_0332 - 24145999-24146052,24146749-24147117,24147158-24147598
Length = 287
Score = 26.6 bits (56), Expect = 4.6
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +3
Query: 102 GNAGGGAPRGRELAGGMGPAGRVY*RNYGL 191
GNAGGGA E GG G AGR+ N G+
Sbjct: 7 GNAGGGAAVAGEWDGG-GIAGRMRGVNAGI 35
>03_06_0244 + 32613914-32614666
Length = 250
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 72 RSVRATVPAYGNAGGGAPRGRELAGGMGP 158
R+V A P G GGG R G+GP
Sbjct: 79 RAVAARTPRRGTPGGGGGVRRAACAGLGP 107
>01_06_1782 - 39842133-39842160,39842531-39842657,39842980-39844675
Length = 616
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = +3
Query: 42 AEHLYGSLRQR---SVRATVPAYGNAGGGAPRGREL 140
A+ L+ +RQR S + YG GG R REL
Sbjct: 200 AQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRAREL 235
>10_05_0019 -
8049145-8049334,8059808-8060618,8060708-8060783,
8060856-8061008
Length = 409
Score = 26.2 bits (55), Expect = 6.1
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = +3
Query: 12 ICTADAHPCAAEHLYGS-LRQRSVRATVPAYGNAGGGAPRGRELAGGMGPAGRV---Y*R 179
+ +AD AA ++GS LRQ V V A G G G +G +GRV + +
Sbjct: 305 LASADRIVMAAARVFGSPLRQPVVSPLVNAKGK-GAAVETSASKLGNLGGSGRVVPTFSK 363
Query: 180 NYGLPXGRRRSLP--IFKTQRDTEQNTSI 260
+ L R LP I + + E TSI
Sbjct: 364 CFDLGIARNLPLPDDIQGSDKLEEHQTSI 392
>06_02_0122 - 12095385-12095713,12096018-12096120
Length = 143
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 93 PAYGNAGGGAPRGRELAGGMGPAGRVY*RNYG 188
P YG GG GR GG G +G Y YG
Sbjct: 90 PGYGGGYGGG-YGRGYGGGYGGSGGGYGGGYG 120
>01_06_1172 - 35115248-35115874
Length = 208
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +3
Query: 57 GSLRQRSVRAT-VPAYGNAGGGAP 125
G L++R++R+ + YG GGG+P
Sbjct: 94 GGLKKRALRSIPIEVYGGGGGGSP 117
>01_06_0176 - 27233553-27234588,27235629-27235768
Length = 391
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 57 GSLRQRSVRATVPAYGNAGGGAPRGRELAGGMGP 158
GS ++V A G GGGA R L GP
Sbjct: 313 GSASGKAVAAAAAVRGTGGGGARVARMLVASKGP 346
>01_03_0140 -
12979580-12980158,12980297-12980479,12980721-12980914,
12980974-12980998
Length = 326
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 97 PMGTLGAERRAVENSPEGWVPREGCTSATTDFRL 198
P T+G E++ +E +P+G+ + TT F L
Sbjct: 168 PYITMGEEKQHLEKTPDGYRIKVSSLGTTTSFTL 201
>01_01_0658 - 5017219-5018066,5018572-5019085
Length = 453
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 21 ADAHPCAAEHLYGSLRQRSVRATVPAYGNAGGGAPRGRELAGGMGPA 161
A ++ C+ HL + R R +V G GGG P G + G A
Sbjct: 42 AASYACSRVHLRAAALAR--RRSVALAGGGGGGPPGGSAIRAAAGNA 86
>12_02_0768 -
22988119-22988223,22988337-22988558,22988645-22988810,
22989176-22989181,22989281-22989453,22989737-22989928,
22990034-22990211,22990302-22990444,22990666-22990755,
22990869-22990991,22991391-22991568,22992213-22992442,
22992557-22992616,22992731-22992798,22992908-22992953
Length = 659
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 212 TSPSSXRKSVVALVHPSRGTHPSGEFSTARRSAPSVP 102
T+ + R +V+A +P+ G STARR PSVP
Sbjct: 477 TTSLNARTAVLAAANPAWGR---AYISTARRVVPSVP 510
>08_02_1621 - 28304013-28304582
Length = 189
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +3
Query: 45 EHLYGSLRQRSVRATVPAYGNAGGGAPRGRELAGGMGP 158
E G R S R G GGG R RE+ GG+ P
Sbjct: 143 ERNLGEARWESEREGDGPCGAEGGGIRRLREVGGGIDP 180
>07_03_0623 -
20033815-20034009,20034308-20034415,20034416-20034478,
20035361-20036221,20036881-20037461,20037551-20037623,
20037756-20037947,20038728-20039513
Length = 952
Score = 25.8 bits (54), Expect = 8.0
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 84 ATVPAYGNAGGGAPRGRELAGGMGPAGRVY*RNYGLPXGRRRSLPIFKTQRDTEQNTSIA 263
A P G+A G A G GMGPAG +N + + R L D + + IA
Sbjct: 20 AQPPNNGSAAGAAAGGGGGGVGMGPAGATPSKNAAMAELKSRVLGALAKLSDRDTH-HIA 78
Query: 264 LPD 272
+ D
Sbjct: 79 VED 81
>06_01_0520 +
3761990-3762327,3763304-3763589,3763746-3763820,
3764013-3764961,3766967-3767064,3768144-3768284,
3768758-3768874,3768924-3769013,3769014-3771818
Length = 1632
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +1
Query: 103 GTLGAERRAVENSPEGWVPREGCTSATTDFRLEEGEV 213
G G +R+A+ E PR GCT F E+
Sbjct: 433 GGKGCKRKAIVEFDEQSSPRRGCTMKRVSFSFSGEEI 469
>04_04_1630 -
34896021-34896143,34896329-34896403,34896500-34896556,
34897176-34897352,34897426-34897492,34898043-34898101,
34898188-34898241,34898455-34898604,34898709-34898918,
34898980-34899039,34899399-34899527,34899616-34899720,
34899935-34900024,34900630-34900695,34901047-34901115,
34901348-34901467,34901572-34901634,34901681-34901817,
34902070-34902160,34902298-34902463,34902700-34904172,
34905666-34905940,34906322-34906819,34906996-34907145,
34907840-34907911,34908006-34908266,34908478-34908558,
34908745-34908996,34909323-34909382,34909602-34909853,
34910385-34910549,34910589-34910849,34911267-34912307,
34913398-34913457,34914055-34914165,34914448-34914534,
34915227-34915300,34915397-34915490,34915644-34915689,
34916397-34916521
Length = 2501
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 39 AAEHLYGSLRQRSVRATVPAYGNAGGGAPRGRELA 143
AA H G +RQ A A+G G P R L+
Sbjct: 414 AAGHKVGVVRQTETAAIKAAHGGGAAGTPFARGLS 448
>03_06_0572 +
34812203-34812278,34812485-34813768,34813973-34814049,
34814299-34814646
Length = 594
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +3
Query: 54 YGSLRQRSVRATVPAYGNAGGGAPRGRELAGGMGPA 161
YG+ V TVP G AG GA G + MGPA
Sbjct: 486 YGAGYSPGVTGTVPVGGGAGAGAGVGVGVT-PMGPA 520
>03_02_0382 -
7958634-7959272,7959358-7959583,7959725-7959810,
7959909-7959989,7960102-7960200,7960348-7960466,
7960557-7960677,7960831-7960881,7961041-7961142,
7962610-7962717,7962877-7962962,7963353-7963449
Length = 604
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 158 GTHPSGEFSTARRSAPSVP 102
G +G FS+ARRSA SVP
Sbjct: 582 GRTVTGPFSSARRSASSVP 600
>03_02_0024 + 5079690-5081351
Length = 553
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 200 SXRKSVVALVHPSRGTHPSG 141
S VVA+VH SRG+H G
Sbjct: 284 SDEDEVVAVVHKSRGSHGEG 303
>03_01_0368 + 2860640-2860855,2860959-2862203
Length = 486
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 180 NYGLPXGRRRSLPIFKTQRDTEQNTSIALP 269
NY +P GRR SL + + D+ IA+P
Sbjct: 140 NYDVPTGRRDSLVSNREEGDSLPGPDIAVP 169
>02_05_0258 +
27222058-27223198,27223297-27223460,27224399-27224575,
27224713-27224761,27224991-27225793
Length = 777
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +3
Query: 81 RATVPAYGNAGGGAPRGRELAGGMGPAGRV 170
R PA+GN P R A G AG +
Sbjct: 318 RQQTPAHGNVAASVPTPRRAADGADVAGEI 347
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,758,541
Number of Sequences: 37544
Number of extensions: 201646
Number of successful extensions: 1356
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 435246480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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