Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_J23
         (226 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   0.61 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   0.61 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   0.61 
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    19   9.9  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          19   9.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    19   9.9  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    19   9.9  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 0.61
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 175 SLPANNLYSQRPDTL 219
           +L A+ LYS+RPD L
Sbjct: 654 TLAASTLYSKRPDLL 668


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 0.61
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 175 SLPANNLYSQRPDTL 219
           +L A+ LYS+RPD L
Sbjct: 654 TLAASTLYSKRPDLL 668


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 0.61
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 175 SLPANNLYSQRPDTL 219
           +L A+ LYS+RPD L
Sbjct: 654 TLAASTLYSKRPDLL 668


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 137 RFSDTDVQAEFSDMKIPH 84
           +F   +V  E+SD+  PH
Sbjct: 28  KFLGWNVPPEYSDLVRPH 45


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -3

Query: 26 RRWYSRP 6
          +RW+SRP
Sbjct: 43 KRWWSRP 49


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 86  HNIFRIVFRSLLLLFIFFQCRRWYSRPS 3
           +NI    FR    L +   C +W S+ S
Sbjct: 348 YNIMSNKFREAFKLMLPNCCGKWSSQKS 375


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 137 RFSDTDVQAEFSDMKIPH 84
           +F   +V  E+SD+  PH
Sbjct: 28  KFLGWNVPPEYSDLVHPH 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,942
Number of Sequences: 438
Number of extensions: 815
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3533460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)