Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_J22
         (300 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121690-1|AAM52017.1|  724|Drosophila melanogaster RE53177p pro...    27   3.3  
AE014298-2880|AAF48977.2|  713|Drosophila melanogaster CG14205-P...    27   3.3  
AE014298-2576|AAF48733.1|  577|Drosophila melanogaster CG12432-P...    27   3.3  

>AY121690-1|AAM52017.1|  724|Drosophila melanogaster RE53177p
           protein.
          Length = 724

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 60  QRPRPSTCNDLDTSFASSTFHTFIHARRLKVLFAAAF 170
           + P+ ST N  +  + S ++HT    RRL V F A +
Sbjct: 38  EHPKNSTLNVGNPEWQSQSYHTISRLRRLAVEFFAQY 74


>AE014298-2880|AAF48977.2|  713|Drosophila melanogaster CG14205-PA
           protein.
          Length = 713

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 60  QRPRPSTCNDLDTSFASSTFHTFIHARRLKVLFAAAF 170
           + P+ ST N  +  + S ++HT    RRL V F A +
Sbjct: 27  EHPKNSTLNVGNPEWQSQSYHTISRLRRLAVEFFAQY 63


>AE014298-2576|AAF48733.1|  577|Drosophila melanogaster CG12432-PA
           protein.
          Length = 577

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 45  PWAGRQRPRPSTCNDLDTSFASSTFHTFIHARRL 146
           P  G ++   +TC DLD+ F+ S+  ++I + RL
Sbjct: 417 PGGGVEQLLTTTCGDLDSGFSGSSGASYIGSLRL 450


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,474,293
Number of Sequences: 53049
Number of extensions: 202351
Number of successful extensions: 342
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 342
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 549010566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)