Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_J21
(349 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 178 1e-45
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 178 1e-45
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 178 1e-45
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 169 1e-42
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 105 2e-23
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 31 0.40
X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm... 28 3.7
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P... 28 3.7
BT023707-1|AAY85107.1| 510|Drosophila melanogaster IP01172p pro... 27 8.6
BT022192-1|AAY51586.1| 510|Drosophila melanogaster IP01169p pro... 27 8.6
BT016036-1|AAV36921.1| 1281|Drosophila melanogaster RE01954p pro... 27 8.6
AY051927-1|AAK93351.1| 587|Drosophila melanogaster LD41072p pro... 27 8.6
AE014297-4414|AAF56919.1| 510|Drosophila melanogaster CG15504-P... 27 8.6
AE013599-2017|AAF58164.2| 1281|Drosophila melanogaster CG8092-PA... 27 8.6
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 178 bits (434), Expect = 1e-45
Identities = 85/114 (74%), Positives = 92/114 (80%)
Frame = +3
Query: 6 RGLSXXXXXXXXXXIVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRV 185
+GLS +VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRV
Sbjct: 7 KGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRV 66
Query: 186 FAVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKW 347
F VSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKW
Sbjct: 67 FEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKW 120
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 178 bits (434), Expect = 1e-45
Identities = 85/114 (74%), Positives = 92/114 (80%)
Frame = +3
Query: 6 RGLSXXXXXXXXXXIVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRV 185
+GLS +VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRV
Sbjct: 7 KGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRV 66
Query: 186 FAVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKW 347
F VSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKW
Sbjct: 67 FEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKW 120
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 178 bits (434), Expect = 1e-45
Identities = 85/114 (74%), Positives = 92/114 (80%)
Frame = +3
Query: 6 RGLSXXXXXXXXXXIVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRV 185
+GLS +VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRV
Sbjct: 7 KGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRV 66
Query: 186 FAVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKW 347
F VSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKW
Sbjct: 67 FEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKW 120
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 169 bits (410), Expect = 1e-42
Identities = 82/115 (71%), Positives = 89/115 (77%), Gaps = 1/115 (0%)
Frame = +3
Query: 6 RGLSXXXXXXXXXXIVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRV 185
+GLS +VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ KGRV
Sbjct: 7 KGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRV 66
Query: 186 FAVSLA-DLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKW 347
F VSL DLQ D D E SFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKW
Sbjct: 67 FEVSLVPDLQKDIDPEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKW 121
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 105 bits (252), Expect = 2e-23
Identities = 50/57 (87%), Positives = 50/57 (87%)
Frame = +3
Query: 177 GRVFAVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKW 347
GRVF VSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKW
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKW 70
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 31.1 bits (67), Expect = 0.40
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 303 MDLTTDKLRWMVKKW 347
MDLTTDK R MVKKW
Sbjct: 1 MDLTTDKYRSMVKKW 15
>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
transmembrane protein protein.
Length = 3004
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -1
Query: 178 PFRP-SDAIFVPWVRLTRVVPTCLLVNMDGALTS 80
PFRP + +FVPW R+ + P + ++ D TS
Sbjct: 963 PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996
>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
protein.
Length = 3004
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -1
Query: 178 PFRP-SDAIFVPWVRLTRVVPTCLLVNMDGALTS 80
PFRP + +FVPW R+ + P + ++ D TS
Sbjct: 963 PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996
>BT023707-1|AAY85107.1| 510|Drosophila melanogaster IP01172p
protein.
Length = 510
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 228 PHHYQPGDQQGRPQKHAPLDPQMQ 157
PHH Q QQ + Q H P Q Q
Sbjct: 346 PHHQQQQQQQQQQQNHLPQHHQQQ 369
>BT022192-1|AAY51586.1| 510|Drosophila melanogaster IP01169p
protein.
Length = 510
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 228 PHHYQPGDQQGRPQKHAPLDPQMQ 157
PHH Q QQ + Q H P Q Q
Sbjct: 346 PHHQQQQQQQQQQQNHLPQHHQQQ 369
>BT016036-1|AAV36921.1| 1281|Drosophila melanogaster RE01954p protein.
Length = 1281
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -3
Query: 170 TLRCNFCSLGAIDKGGAHLSLGEHGRRFNIVPVFTGERINNLLLNTLL 27
+LRC CSL ++KG L +H + ++ T + LL N++L
Sbjct: 908 SLRCQKCSLSFLEKG----DLKQHAVQHHVSMTKTNRPVRLLLNNSML 951
>AY051927-1|AAK93351.1| 587|Drosophila melanogaster LD41072p
protein.
Length = 587
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -3
Query: 170 TLRCNFCSLGAIDKGGAHLSLGEHGRRFNIVPVFTGERINNLLLNTLL 27
+LRC CSL ++KG L +H + ++ T + LL N++L
Sbjct: 214 SLRCQKCSLSFLEKG----DLKQHAVQHHVSMTKTNRPVRLLLNNSML 257
>AE014297-4414|AAF56919.1| 510|Drosophila melanogaster CG15504-PA
protein.
Length = 510
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 228 PHHYQPGDQQGRPQKHAPLDPQMQ 157
PHH Q QQ + Q H P Q Q
Sbjct: 346 PHHQQQQQQQQQQQNHLPQHHQQQ 369
>AE013599-2017|AAF58164.2| 1281|Drosophila melanogaster CG8092-PA,
isoform A protein.
Length = 1281
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -3
Query: 170 TLRCNFCSLGAIDKGGAHLSLGEHGRRFNIVPVFTGERINNLLLNTLL 27
+LRC CSL ++KG L +H + ++ T + LL N++L
Sbjct: 908 SLRCQKCSLSFLEKG----DLKQHAVQHHVSMTKTNRPVRLLLNNSML 951
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,446,696
Number of Sequences: 53049
Number of extensions: 361344
Number of successful extensions: 1004
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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