Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_J21
         (349 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical pr...   151   1e-37
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical...    29   0.91 
U50191-6|AAK31554.2|  235|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical pr...    27   2.8  
Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical pr...    27   2.8  
Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical pr...    27   2.8  
Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical pr...    27   2.8  
AC024756-2|AAK29884.1|  413|Caenorhabditis elegans Hypothetical ...    27   2.8  
Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical pr...    27   4.9  
AL032633-1|CAA21594.1|  430|Caenorhabditis elegans Hypothetical ...    27   4.9  
AF024491-2|AAT92081.1|  765|Caenorhabditis elegans Hypothetical ...    27   4.9  
AF098505-2|AAC67416.2|  814|Caenorhabditis elegans Hypothetical ...    26   8.5  
AF016415-8|AAW88415.1|  297|Caenorhabditis elegans Serpentine re...    26   8.5  

>Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical
           protein F56F3.5 protein.
          Length = 257

 Score =  151 bits (366), Expect = 1e-37
 Identities = 71/99 (71%), Positives = 83/99 (83%)
 Frame = +3

Query: 51  VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFAVSLADLQADSDAE 230
           VDPF+RK+WYD+KAP+MF  RQVG TL+NRTQGTKIASEGLKGRVF VSL DL   +++E
Sbjct: 20  VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL---NNSE 76

Query: 231 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKW 347
             FRKF+LIAEDVQG+NVL NFH M +T DKL  +VKKW
Sbjct: 77  ADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKW 115


>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
            protein Y66D12A.14 protein.
          Length = 2870

 Score = 29.1 bits (62), Expect = 0.91
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = -1

Query: 193  TAKTRPFRPSDAIFVPWVRLTRVVPTCLLVNMDGA 89
            T+K +P R  D I V   R T     CL V   GA
Sbjct: 2175 TSKAQPIRSDDVISVAGTRSTETTMKCLAVQFTGA 2209


>U50191-6|AAK31554.2|  235|Caenorhabditis elegans Hypothetical
           protein T14B4.8 protein.
          Length = 235

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -1

Query: 160 AIFVPWVRLTRVVPTCLLVNMDGALTSYQSLRVKG 56
           + F+P++R  R VPT  +++ +G +  Y +L   G
Sbjct: 119 SFFIPFLRPRRTVPTFSIIDWNGEVLGYYALASDG 153


>Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical
           protein C38C10.5b protein.
          Length = 1374

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 91  RRPCSPRDKWAPPLSIAPREQKL 159
           R P   ++ + PP  I PREQKL
Sbjct: 86  RMPSKIKEAFIPPAKITPREQKL 108


>Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical
           protein C38C10.5a protein.
          Length = 1368

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 91  RRPCSPRDKWAPPLSIAPREQKL 159
           R P   ++ + PP  I PREQKL
Sbjct: 86  RMPSKIKEAFIPPAKITPREQKL 108


>Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical
           protein C38C10.5b protein.
          Length = 1374

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 91  RRPCSPRDKWAPPLSIAPREQKL 159
           R P   ++ + PP  I PREQKL
Sbjct: 86  RMPSKIKEAFIPPAKITPREQKL 108


>Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical
           protein C38C10.5a protein.
          Length = 1368

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 91  RRPCSPRDKWAPPLSIAPREQKL 159
           R P   ++ + PP  I PREQKL
Sbjct: 86  RMPSKIKEAFIPPAKITPREQKL 108


>AC024756-2|AAK29884.1|  413|Caenorhabditis elegans Hypothetical
           protein Y34D9A.1 protein.
          Length = 413

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -3

Query: 311 EVHAVEIAENITSLDILSDKSELAE 237
           E+H +E AE++ SL +L  KSE+ +
Sbjct: 63  EMHIIEPAEHMKSLKVLMQKSEIEQ 87


>Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical
           protein E01G4.4 protein.
          Length = 534

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 231 FPHHYQPGDQQGRPQKHAPLDPQMQ 157
           + ++ Q   QQGRPQ++A   PQ Q
Sbjct: 34  YGYNNQQQQQQGRPQQYAGYPPQRQ 58


>AL032633-1|CAA21594.1|  430|Caenorhabditis elegans Hypothetical
           protein Y106G6A.1 protein.
          Length = 430

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 78  YDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFAVSL 200
           Y  K PS+  +  +G  +   T G+   +EG KG  +AV +
Sbjct: 146 YSEKLPSIPRRYSLGKLIGRGTLGSVYLAEGKKGGTYAVKI 186


>AF024491-2|AAT92081.1|  765|Caenorhabditis elegans Hypothetical
           protein C24A1.3b protein.
          Length = 765

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -3

Query: 296 EIAENITSLDILSDKSELAERPFRITISLEISKGDR 189
           E  EN +   +L ++  + +  FR+ ISL++++G R
Sbjct: 593 EFVENGSLFRLLHEEKRVMDPAFRLRISLDVARGMR 628


>AF098505-2|AAC67416.2|  814|Caenorhabditis elegans Hypothetical
           protein Y71H10A.1a protein.
          Length = 814

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +3

Query: 144 QGTKIASEGLKGRVFAV--SLADLQADSDAERSFRKFRL 254
           +GT+IAS+  KGR  A+  S  D Q  + A RS  +  +
Sbjct: 34  EGTEIASDIFKGRTLAIYTSGGDSQGMNSAVRSITRMAI 72


>AF016415-8|AAW88415.1|  297|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 32 protein.
          Length = 297

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 346 HFFTIHLSLSVVRSMPWKLQRTLRPWTSSAISL 248
           H F+ H  L V   +PW    T R   + AISL
Sbjct: 73  HLFSNHRGLIVTLGLPWSNFATCRSAIALAISL 105


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,209,518
Number of Sequences: 27780
Number of extensions: 172916
Number of successful extensions: 433
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)