Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_J18
(124 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 0.59
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 1.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 1.4
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 1.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 1.8
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 20 2.4
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 20 2.4
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 20 2.4
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 19 5.5
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 19 5.5
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 19 5.5
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 19 5.5
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 19 7.3
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 19 7.3
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 19 7.3
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 19 7.3
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 19 7.3
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 19 7.3
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 18 9.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 18 9.6
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 18 9.6
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 22.2 bits (45), Expect = 0.59
Identities = 8/32 (25%), Positives = 14/32 (43%)
Frame = +3
Query: 9 EGERMQRGETRCCGITGEENSLRLHKNLWFDK 104
+G+ + + C + G+E WFDK
Sbjct: 18 KGKNASQAHKKLCAVYGDEALKERQCQNWFDK 49
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 1.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -1
Query: 124 PVVHSTRLSNQRFLCNRSEFSSPVIPQHLVSP 29
P HS + + + R++ + PQHL+ P
Sbjct: 358 PKAHSKGGTLENTINGRADEEAAPAPQHLIHP 389
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 1.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -1
Query: 124 PVVHSTRLSNQRFLCNRSEFSSPVIPQHLVSP 29
P HS + + + R++ + PQHL+ P
Sbjct: 358 PKAHSKGGTLENTINGRADEEAAPAPQHLIHP 389
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.0 bits (42), Expect = 1.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -1
Query: 124 PVVHSTRLSNQRFLCNRSEFSSPVIPQHLVSP 29
P HS + + + R++ + PQHL+ P
Sbjct: 296 PKAHSKGGTLENTINGRADEEAAPAPQHLIHP 327
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 66 NSLRLHKNLWFD 101
NS+ LH N W D
Sbjct: 1475 NSITLHLNAWSD 1486
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -1
Query: 121 VVHSTRLSNQRFLCNRSE 68
++HS RL N F C E
Sbjct: 37 ILHSDRLLNNYFKCLMDE 54
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -1
Query: 121 VVHSTRLSNQRFLCNRSE 68
++HS RL N F C E
Sbjct: 37 ILHSDRLLNNYFKCLMDE 54
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -1
Query: 121 VVHSTRLSNQRFLCNRSE 68
++HS RL N F C E
Sbjct: 37 ILHSDRLLNNYFKCLMDE 54
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 34 KLDVAELPERKIRFDYIK 87
K+D+ + P + RF+ IK
Sbjct: 154 KMDMTDPPYSEARFEEIK 171
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 19.0 bits (37), Expect = 5.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 34 KLDVAELPERKIRFDYIK 87
K+D E P + RF+ IK
Sbjct: 81 KMDSTEPPYSETRFEEIK 98
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 19.0 bits (37), Expect = 5.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 34 KLDVAELPERKIRFDYIK 87
K+D E P + RF+ IK
Sbjct: 97 KMDSTEPPYSETRFEEIK 114
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 34 KLDVAELPERKIRFDYIK 87
K+D E P + RF+ IK
Sbjct: 154 KMDSTEPPYSETRFEEIK 171
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 18.6 bits (36), Expect = 7.3
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 85 KIFGSINELNELL 123
KIF + NE+N+L+
Sbjct: 89 KIFLNENEINQLI 101
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 18.6 bits (36), Expect = 7.3
Identities = 5/10 (50%), Positives = 9/10 (90%)
Frame = -2
Query: 96 TKDFYVIEAN 67
T+++Y+IE N
Sbjct: 118 TEEYYIIEVN 127
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 18.6 bits (36), Expect = 7.3
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 42 CCGITGEENSLRLHKNLW 95
C + NSLR HK+++
Sbjct: 38 CKRVYSSLNSLRNHKSIY 55
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = -1
Query: 88 FLCNRSEFSSPVI 50
F CNRSE ++
Sbjct: 760 FACNRSELVEAIL 772
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 18.6 bits (36), Expect = 7.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 101 IEPKIFM*SKRIFLS 57
I P+I KRI+LS
Sbjct: 14 ISPQILKNDKRIYLS 28
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 18.6 bits (36), Expect = 7.3
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2
Query: 90 DFYVIEANFPLR*FRN 43
D Y++E FP R +N
Sbjct: 420 DLYLLELGFPPRSKKN 435
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/13 (38%), Positives = 9/13 (69%)
Frame = -2
Query: 102 YRTKDFYVIEANF 64
Y D+Y++ AN+
Sbjct: 192 YNNIDYYLLAANY 204
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/13 (38%), Positives = 9/13 (69%)
Frame = -2
Query: 102 YRTKDFYVIEANF 64
Y D+Y++ AN+
Sbjct: 192 YNNIDYYLLAANY 204
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/18 (33%), Positives = 8/18 (44%)
Frame = +3
Query: 36 TRCCGITGEENSLRLHKN 89
TRC + N+ H N
Sbjct: 581 TRCANSDNQNNNQNKHNN 598
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,892
Number of Sequences: 438
Number of extensions: 364
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 21
effective length of database: 137,145
effective search space used: 2605755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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