Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_J17
         (241 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   0.69 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   2.1  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    19   8.5  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        19   8.5  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 0.69
 Identities = 14/64 (21%), Positives = 19/64 (29%)
 Frame = +2

Query: 8   GRVSPPALASRTDAATPRTSTSDSPAPTRASHXXXXXXXXXXXXXXXXXXXXPCSTARTS 187
           G     + A  TDA+TP T T+     T  +                        T  T+
Sbjct: 200 GAARDESKAGSTDASTPATVTTTGATTTLPAASATGTGPATPSAVVATSNATAAMTTGTT 259

Query: 188 PAPT 199
             PT
Sbjct: 260 TIPT 263


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 2.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 23  PALASRTDAATPRTSTSDSPAPTRAS 100
           PA + R  +A   +STS SP P  ++
Sbjct: 823 PASSPRYLSAAATSSTSTSPRPASST 848



 Score = 21.0 bits (42), Expect = 2.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 47  AATPRTSTSDSPAPTRAS 100
           AAT  TSTS  PA + A+
Sbjct: 833 AATSSTSTSPRPASSTAA 850


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 148 TDDESSVLDSQD 183
           TDD SSV  S D
Sbjct: 220 TDDHSSVQSSSD 231


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 8/30 (26%), Positives = 12/30 (40%)
 Frame = +1

Query: 79  PRADPRLTHHNQSGXXXXXXXXQTDDESSV 168
           P  +  L HH+Q+G             S+V
Sbjct: 165 PMVNYTLGHHHQNGATPSSLVSSASASSAV 194


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.306    0.123    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,143
Number of Sequences: 438
Number of extensions: 558
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4024224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.3 bits)