Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_J15
(371 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18 pro... 134 9e-32
BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18 p... 134 9e-32
BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18 p... 134 9e-32
AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18 p... 134 9e-32
BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18 p... 132 3e-31
DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18 p... 105 5e-23
AM492791-1|CAM34545.1| 712|Homo sapiens autogenous vein graft r... 29 4.8
Z97630-5|CAI21418.1| 564|Homo sapiens protein ( Human DNA seque... 28 8.4
CR456436-1|CAG30322.1| 607|Homo sapiens dJ1014D13.1 protein. 28 8.4
BC029265-1|AAH29265.1| 564|Homo sapiens eukaryotic translation ... 28 8.4
BC007510-1|AAH07510.1| 564|Homo sapiens eukaryotic translation ... 28 8.4
BC001101-1|AAH01101.1| 564|Homo sapiens eukaryotic translation ... 28 8.4
AL022311-2|CAI18865.1| 564|Homo sapiens protein ( Human DNA seq... 28 8.4
AK222529-1|BAD96249.1| 564|Homo sapiens eukaryotic translation ... 28 8.4
AK222496-1|BAD96216.1| 564|Homo sapiens eukaryotic translation ... 28 8.4
AF109359-1|AAQ13507.1| 564|Homo sapiens MSTP005 protein. 28 8.4
>L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 134 bits (324), Expect = 9e-32
Identities = 66/119 (55%), Positives = 81/119 (68%)
Frame = +3
Query: 15 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 194
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 195 ISLFRLARHMKKPTREGLIAVVVGTVSNDVRRYTVPKMTVAALHVTGKARARILAAGGE 371
+SL R+ R MK P RE AVVVGT+++DVR VPK+ V AL VT +AR+RIL AGG+
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGK 119
>BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 134 bits (324), Expect = 9e-32
Identities = 66/119 (55%), Positives = 81/119 (68%)
Frame = +3
Query: 15 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 194
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 195 ISLFRLARHMKKPTREGLIAVVVGTVSNDVRRYTVPKMTVAALHVTGKARARILAAGGE 371
+SL R+ R MK P RE AVVVGT+++DVR VPK+ V AL VT +AR+RIL AGG+
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGK 119
>BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 134 bits (324), Expect = 9e-32
Identities = 66/119 (55%), Positives = 81/119 (68%)
Frame = +3
Query: 15 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 194
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 195 ISLFRLARHMKKPTREGLIAVVVGTVSNDVRRYTVPKMTVAALHVTGKARARILAAGGE 371
+SL R+ R MK P RE AVVVGT+++DVR VPK+ V AL VT +AR+RIL AGG+
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGK 119
>AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 134 bits (324), Expect = 9e-32
Identities = 66/119 (55%), Positives = 81/119 (68%)
Frame = +3
Query: 15 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 194
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 195 ISLFRLARHMKKPTREGLIAVVVGTVSNDVRRYTVPKMTVAALHVTGKARARILAAGGE 371
+SL R+ R MK P RE AVVVGT+++DVR VPK+ V AL VT +AR+RIL AGG+
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGK 119
>BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 132 bits (319), Expect = 3e-31
Identities = 65/119 (54%), Positives = 80/119 (67%)
Frame = +3
Query: 15 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 194
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 195 ISLFRLARHMKKPTREGLIAVVVGTVSNDVRRYTVPKMTVAALHVTGKARARILAAGGE 371
+ L R+ R MK P RE AVVVGT+++DVR VPK+ V AL VT +AR+RIL AGG+
Sbjct: 61 LCLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGK 119
>DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18
protein.
Length = 164
Score = 105 bits (252), Expect = 5e-23
Identities = 50/81 (61%), Positives = 63/81 (77%)
Frame = +3
Query: 129 TNAKFNQIILRRLFMSRINRPPISLFRLARHMKKPTREGLIAVVVGTVSNDVRRYTVPKM 308
TN+ FNQ++L+RLFMSR NRPP+SL R+ R MK P RE AVVVGT+++DVR VPK+
Sbjct: 16 TNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKL 75
Query: 309 TVAALHVTGKARARILAAGGE 371
V AL VT +AR+RIL AGG+
Sbjct: 76 KVCALRVTSRARSRILRAGGK 96
>AM492791-1|CAM34545.1| 712|Homo sapiens autogenous vein graft
remodeling associated protein 8 protein.
Length = 712
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -2
Query: 367 PPAAKMRARAFPVTCSAATVILGTVYRLTSFETVPTTTAIKPSRV-GFFMW-RAKRNKEI 194
PP + P + T I+ T+ T ET TTT S V G +W K +E+
Sbjct: 446 PPPLLSSTSSLPTPTNTITAIITTITINTKTETTTTTTQNSSSEVDGIMVWMMTKERREV 505
>Z97630-5|CAI21418.1| 564|Homo sapiens protein ( Human DNA sequence
from clone RP3-466N1 on chromosome 22q12-13. ).
Length = 564
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 149 DHPTEIVYEPYQPTSDFFVPFGTPHEE-AYTRGFDR 253
D+ +E Y+PY SD+ + G P ++ AY R +++
Sbjct: 7 DYESEAAYDPYAYPSDYDMHTGDPKQDLAYERQYEQ 42
>CR456436-1|CAG30322.1| 607|Homo sapiens dJ1014D13.1 protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 149 DHPTEIVYEPYQPTSDFFVPFGTPHEE-AYTRGFDR 253
D+ +E Y+PY SD+ + G P ++ AY R +++
Sbjct: 50 DYESEAAYDPYAYPSDYDMHTGDPKQDLAYERQYEQ 85
>BC029265-1|AAH29265.1| 564|Homo sapiens eukaryotic translation
initiation factor 3, subunit E interacting protein
protein.
Length = 564
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 149 DHPTEIVYEPYQPTSDFFVPFGTPHEE-AYTRGFDR 253
D+ +E Y+PY SD+ + G P ++ AY R +++
Sbjct: 7 DYESEAAYDPYAYPSDYDMHTGDPKQDLAYERQYEQ 42
>BC007510-1|AAH07510.1| 564|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 interacting protein
protein.
Length = 564
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 149 DHPTEIVYEPYQPTSDFFVPFGTPHEE-AYTRGFDR 253
D+ +E Y+PY SD+ + G P ++ AY R +++
Sbjct: 7 DYESEAAYDPYAYPSDYDMHTGDPKQDLAYERQYEQ 42
>BC001101-1|AAH01101.1| 564|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 interacting protein
protein.
Length = 564
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 149 DHPTEIVYEPYQPTSDFFVPFGTPHEE-AYTRGFDR 253
D+ +E Y+PY SD+ + G P ++ AY R +++
Sbjct: 7 DYESEAAYDPYAYPSDYDMHTGDPKQDLAYERQYEQ 42
>AL022311-2|CAI18865.1| 564|Homo sapiens protein ( Human DNA
sequence from clone RP5-1014D13 on chromosome
22q13.1-13.2. ).
Length = 564
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 149 DHPTEIVYEPYQPTSDFFVPFGTPHEE-AYTRGFDR 253
D+ +E Y+PY SD+ + G P ++ AY R +++
Sbjct: 7 DYESEAAYDPYAYPSDYDMHTGDPKQDLAYERQYEQ 42
>AK222529-1|BAD96249.1| 564|Homo sapiens eukaryotic translation
initiation factor 3 subunit 6 interacting protein varian
protein.
Length = 564
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 149 DHPTEIVYEPYQPTSDFFVPFGTPHEE-AYTRGFDR 253
D+ +E Y+PY SD+ + G P ++ AY R +++
Sbjct: 7 DYESEAAYDPYAYPSDYDMHTGDPKQDLAYERQYEQ 42
>AK222496-1|BAD96216.1| 564|Homo sapiens eukaryotic translation
initiation factor 3 subunit 6 interacting protein varian
protein.
Length = 564
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 149 DHPTEIVYEPYQPTSDFFVPFGTPHEE-AYTRGFDR 253
D+ +E Y+PY SD+ + G P ++ AY R +++
Sbjct: 7 DYESEAAYDPYAYPSDYDMHTGDPKQDLAYERQYEQ 42
>AF109359-1|AAQ13507.1| 564|Homo sapiens MSTP005 protein.
Length = 564
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 149 DHPTEIVYEPYQPTSDFFVPFGTPHEE-AYTRGFDR 253
D+ +E Y+PY SD+ + G P ++ AY R +++
Sbjct: 7 DYESEAAYDPYAYPSDYDMHTGDPKQDLAYERQYEQ 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,401,096
Number of Sequences: 237096
Number of extensions: 1017764
Number of successful extensions: 1685
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1685
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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