Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_J15
         (371 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    25   0.22 
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    25   0.22 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          24   0.66 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   2.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   2.7  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   4.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   4.7  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 25.4 bits (53), Expect = 0.22
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 297 QCIASHHSRLCQRLQRSNPRV*ASSCGVPNGTK 199
           Q +  H S LC    R N +    SC  P+G K
Sbjct: 37  QAVNGHCSHLCLPAPRINSKSPLLSCACPDGLK 69


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 25.4 bits (53), Expect = 0.22
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 297 QCIASHHSRLCQRLQRSNPRV*ASSCGVPNGTK 199
           Q +  H S LC    R N +    SC  P+G K
Sbjct: 37  QAVNGHCSHLCLPAPRINSKSPLLSCACPDGLK 69


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 301 GTVYRLTSFETVPTTTA 251
           G++Y L ++  VPTTTA
Sbjct: 368 GSIYFLGNYSLVPTTTA 384


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 370 SPPAAKMRARAFPVTCSAATV 308
           SPP  + R+ +   TCS  TV
Sbjct: 277 SPPVKQHRSSSASTTCSGHTV 297


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = -3

Query: 291 IASHHSRLCQRLQRS---NPRV*ASSCG 217
           +ASHHS L   L RS   +P V  S+ G
Sbjct: 283 LASHHSHLSSALGRSACHSPGVYPSTAG 310


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 182 QPTSDFFVPFGTPHEEAY 235
           +  +D+F+P G P  + Y
Sbjct: 416 EENTDYFMPIGRPRAKDY 433


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 10  SRWVSTSIINTT 45
           +RW +TS+I TT
Sbjct: 779 TRWPATSVITTT 790


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,900
Number of Sequences: 438
Number of extensions: 1849
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)