Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_J14
         (200 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    25   0.086
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   3.2  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    20   3.2  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    19   4.3  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    19   5.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    19   5.6  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               19   5.6  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               19   5.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    19   5.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    19   7.4  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    18   9.8  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        18   9.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        18   9.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        18   9.8  

>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 25.0 bits (52), Expect = 0.086
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = -2

Query: 178 ETDIKIGWIKYFSYVNVIVTHAT 110
           +TD+ +  +K+F+Y+ VI  H++
Sbjct: 154 QTDVWVELLKHFNYMKVIFIHSS 176



 Score = 19.8 bits (39), Expect = 3.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 75  ILCRHFDVT 49
           ILC HF+VT
Sbjct: 441 ILCPHFNVT 449


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -2

Query: 139 YVNVIVTHATVSITSNLL 86
           Y N++ TH    I  ++L
Sbjct: 361 YCNIVATHLVCGILGSIL 378


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 81  FRKRLLVIDTVACV 122
           FRK +L++ T+A V
Sbjct: 60  FRKNMLLVFTIAAV 73



 Score = 18.2 bits (35), Expect = 9.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 83  PQKVARYRYRCMRYYDV 133
           P+   R  YR + YY V
Sbjct: 128 PKGSGRMGYRALLYYTV 144


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 8/36 (22%), Positives = 17/36 (47%)
 Frame = -2

Query: 169 IKIGWIKYFSYVNVIVTHATVSITSNLLRKSDSLQT 62
           + + WI ++     I    T+ +TS L   + + Q+
Sbjct: 228 VVMSWIAFWIKPEAIPARVTLGVTSLLTLATQNTQS 263


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 187 DDCETDIKIGWIKYFSYVN 131
           D C +D  + +I +  YVN
Sbjct: 355 DCCPSDRMVYFITWLGYVN 373


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 187 DDCETDIKIGWIKYFSYVN 131
           D C +D  + +I +  YVN
Sbjct: 355 DCCPSDRMVYFITWLGYVN 373


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -1

Query: 134 KRHSNACNGIYNEQP 90
           K+  N C  I NE P
Sbjct: 93  KKLFNKCKSIQNEDP 107


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 196 ILIDDCETDI 167
           IL+D CE DI
Sbjct: 325 ILVDMCEQDI 334


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 187 DDCETDIKIGWIKYFSYVN 131
           D C +D  + +I +  YVN
Sbjct: 355 DCCPSDRMVYFITWLGYVN 373


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +2

Query: 92  VARYRYRCMRYYD 130
           V RY  RC   YD
Sbjct: 453 VERYEVRCYPRYD 465


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 141 LKYFIHPIF 167
           L YFI PI+
Sbjct: 452 LSYFIEPIY 460


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 36  KRLKE*HQNVC 68
           +RLKE + N+C
Sbjct: 209 RRLKETYSNMC 219


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 36  KRLKE*HQNVC 68
           +RLKE + N+C
Sbjct: 209 RRLKETYSNMC 219


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 36  KRLKE*HQNVC 68
           +RLKE + N+C
Sbjct: 209 RRLKETYSNMC 219


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,947
Number of Sequences: 438
Number of extensions: 709
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2659293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)