Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_J13
(277 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 21 2.8
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 2.8
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 21 2.8
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 3.7
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 20 4.9
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 20 4.9
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 20 4.9
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 20 4.9
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 20 4.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 20 4.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 20 4.9
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 19 8.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 19 8.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 19 8.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 19 8.6
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.0 bits (42), Expect = 2.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 202 VFYAAIAGLVMSKPYLRSFVTNND 273
V +A A +V+ P+L S T ND
Sbjct: 462 VCHADDAYMVVDTPFLASTTTTND 485
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.0 bits (42), Expect = 2.8
Identities = 7/19 (36%), Positives = 9/19 (47%)
Frame = -2
Query: 63 CTEHRRQNRSQNTLHWSIV 7
C HR +R N WS +
Sbjct: 107 CLPHRNSDRDLNIRKWSSI 125
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.0 bits (42), Expect = 2.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 202 VFYAAIAGLVMSKPYLRSFVTNND 273
V +A A +V+ P+L S T ND
Sbjct: 462 VCHADDAYMVVDTPFLASTTTTND 485
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.6 bits (41), Expect = 3.7
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 150 FVFA*IARRAIDGSPGLC 203
+ F + + DG PGLC
Sbjct: 483 YAFRDMHKELCDGKPGLC 500
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 20.2 bits (40), Expect = 4.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 236 DITKPAMAA*KTESWRPIDR 177
D + P + ESWRPI R
Sbjct: 133 DKSFPGVGVIDFESWRPIFR 152
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 20.2 bits (40), Expect = 4.9
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -1
Query: 88 WKRPGRDLLHRAPSTEPQ 35
WK RD R S EP+
Sbjct: 63 WKERSRDRTERERSREPK 80
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.2 bits (40), Expect = 4.9
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -1
Query: 88 WKRPGRDLLHRAPSTEPQ 35
WK RD R S EP+
Sbjct: 63 WKERSRDRTERERSREPK 80
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.2 bits (40), Expect = 4.9
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -1
Query: 88 WKRPGRDLLHRAPSTEPQ 35
WK RD R S EP+
Sbjct: 63 WKERSRDRTERERSREPK 80
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.2 bits (40), Expect = 4.9
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -1
Query: 88 WKRPGRDLLHRAPSTEPQ 35
WK RD R S EP+
Sbjct: 63 WKERSRDRTERERSREPK 80
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.2 bits (40), Expect = 4.9
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -2
Query: 102 SLLCHGSDLVGIFC 61
+++C S L+G+FC
Sbjct: 420 AIVCFVSYLIGLFC 433
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.2 bits (40), Expect = 4.9
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -2
Query: 102 SLLCHGSDLVGIFC 61
+++C S L+G+FC
Sbjct: 473 AIVCFVSYLIGLFC 486
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 19.4 bits (38), Expect = 8.6
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 226 NRRWLRKKQSPG 191
NRR KKQ+PG
Sbjct: 58 NRRTKWKKQNPG 69
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 19.4 bits (38), Expect = 8.6
Identities = 5/14 (35%), Positives = 9/14 (64%)
Frame = +2
Query: 53 CSVQKIPTRSLPWQ 94
C Q +PT ++ W+
Sbjct: 731 CQAQGVPTPTIVWK 744
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 19.4 bits (38), Expect = 8.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -3
Query: 110 NSPACFAMEATWSGSFAPSTVDRTAAKIPCIG 15
+SP + AT S S +P TAA + G
Sbjct: 825 SSPRYLSAAATSSTSTSPRPASSTAATLVLSG 856
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 19.4 bits (38), Expect = 8.6
Identities = 5/14 (35%), Positives = 9/14 (64%)
Frame = +2
Query: 53 CSVQKIPTRSLPWQ 94
C Q +PT ++ W+
Sbjct: 727 CQAQGVPTPTIVWK 740
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,319
Number of Sequences: 438
Number of extensions: 1651
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5388717
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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