Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_J11
(195 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0947 + 26248378-26248494,26248600-26248764,26248843-262489... 64 1e-11
09_06_0252 + 21867179-21867283,21868362-21868526,21868621-218687... 64 1e-11
06_03_0508 - 21607706-21608863,21608943-21609090,21609411-216095... 64 2e-11
08_02_1543 + 27783063-27783182,27784321-27784485,27784577-277846... 60 2e-10
08_02_1544 + 27787089-27787172,27787448-27787612,27787741-277878... 57 2e-09
02_05_1082 - 33976038-33978035 44 2e-05
05_01_0486 - 4047055-4049013 44 2e-05
08_02_1132 - 24530921-24532906 43 4e-05
12_01_0486 + 3854889-3855014,3855897-3856089,3856206-3856310,385... 40 3e-04
08_01_0409 + 3625071-3625228,3625829-3625905,3626310-3626889,362... 39 5e-04
02_05_0564 + 30003817-30005778 39 5e-04
10_01_0062 - 818396-818538,819482-819693,819936-820420,820540-82... 36 0.003
03_02_0296 + 7191455-7191615,7192031-7192071,7192156-7192741,719... 36 0.003
11_01_0518 + 4057428-4057538,4059609-4059801,4059921-4060025,406... 33 0.032
02_04_0195 + 20830849-20830950,20831498-20831690,20831800-208319... 31 0.13
07_03_1615 - 28157237-28157472,28157649-28157728,28157853-281580... 28 1.2
09_04_0285 + 16390786-16391291,16391370-16391957,16392034-163921... 26 3.7
09_02_0406 - 8629287-8629304,8629384-8629865,8629977-8630291,863... 25 6.4
01_06_0100 - 26424769-26425545,26425666-26425697,26425778-264258... 25 6.4
05_03_0085 - 8271718-8272005,8272110-8272393,8273610-8274012,827... 25 8.5
04_03_0250 - 13477020-13477550,13477572-13477933,13478026-134786... 25 8.5
>06_03_0947 +
26248378-26248494,26248600-26248764,26248843-26248952,
26249065-26249179,26249310-26249408,26249485-26249694,
26249802-26250965
Length = 659
Score = 64.5 bits (150), Expect = 1e-11
Identities = 28/53 (52%), Positives = 31/53 (58%)
Frame = +2
Query: 32 YLFIYCCLYFMIKLNIEDAASTFLYFGYTVIMVXXXXXXTGTIGFMACFWFVR 190
YLF+Y YF KL+I S LYFGY +I TGTIGF ACFWF R
Sbjct: 598 YLFLYAAFYFFTKLDITKVVSGVLYFGYMLIASAAFFVLTGTIGFYACFWFTR 650
>09_06_0252 +
21867179-21867283,21868362-21868526,21868621-21868730,
21868802-21868904,21868998-21869110,21869204-21869357,
21869476-21870633
Length = 635
Score = 64.1 bits (149), Expect = 1e-11
Identities = 29/59 (49%), Positives = 32/59 (54%)
Frame = +2
Query: 14 SARGAGYLFIYCCLYFMIKLNIEDAASTFLYFGYTVIMVXXXXXXTGTIGFMACFWFVR 190
S A YLF+Y YF KL I S LYFGY ++ TGTIGF ACFWF R
Sbjct: 568 SGSSALYLFLYAAFYFFTKLQITKLVSGILYFGYMLLASLAFFVLTGTIGFCACFWFTR 626
>06_03_0508 -
21607706-21608863,21608943-21609090,21609411-21609523,
21609612-21609705,21609841-21609950,21610093-21610257,
21611660-21611800
Length = 642
Score = 63.7 bits (148), Expect = 2e-11
Identities = 29/53 (54%), Positives = 31/53 (58%)
Frame = +2
Query: 32 YLFIYCCLYFMIKLNIEDAASTFLYFGYTVIMVXXXXXXTGTIGFMACFWFVR 190
YLF Y YF KL I S LYFGY +I+ TGTIGF ACFWFVR
Sbjct: 581 YLFAYAIFYFFNKLEITKLVSGILYFGYMLIISYAFFVLTGTIGFYACFWFVR 633
>08_02_1543 +
27783063-27783182,27784321-27784485,27784577-27784686,
27784771-27784876,27784952-27785050,27785450-27786607
Length = 585
Score = 60.5 bits (140), Expect = 2e-10
Identities = 28/59 (47%), Positives = 31/59 (52%)
Frame = +2
Query: 14 SARGAGYLFIYCCLYFMIKLNIEDAASTFLYFGYTVIMVXXXXXXTGTIGFMACFWFVR 190
S A YLF+Y YF KL I S LYFGY ++ TGTIGF AC WF R
Sbjct: 518 SGSSAIYLFLYAGFYFFTKLQITKLVSGILYFGYMLLASFSFFVLTGTIGFCACLWFTR 576
>08_02_1544 +
27787089-27787172,27787448-27787612,27787741-27787850,
27788360-27788513,27788643-27788937,27788996-27789798
Length = 536
Score = 56.8 bits (131), Expect = 2e-09
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +2
Query: 26 AGYLFIYCCLYFMIKLNIEDAASTFLYFGYTVIMVXXXXXXTGTIGFMACFWFVR 190
A YLF+Y +F KL+I S YFGY +++ TGTIGF +CF+F R
Sbjct: 473 AVYLFLYATFFFFAKLSIVKPVSVMFYFGYMLVVSYAFFLLTGTIGFFSCFFFTR 527
>02_05_1082 - 33976038-33978035
Length = 665
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 32 YLFIYCCLYFMIKL-NIEDAASTFLYFGYTVIMVXXXXXXTGTIGFMACFWFV 187
Y+F+Y Y + L ++ S LY GY++ MV TGT+GF++ F FV
Sbjct: 603 YIFLYSINYLVFDLKSLSGPVSATLYLGYSLFMVIAIMLATGTVGFISSFCFV 655
>05_01_0486 - 4047055-4049013
Length = 652
Score = 43.6 bits (98), Expect = 2e-05
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 26 AGYLFIYCCLYFMIKL-NIEDAASTFLYFGYTVIMVXXXXXXTGTIGFMACFWFV 187
A Y+F+Y Y + L ++ S LY GY++IM TG IGF+ F+FV
Sbjct: 588 AFYVFLYSINYLVFDLRSLSGPVSATLYLGYSLIMALAIMLSTGAIGFLLSFYFV 642
>08_02_1132 - 24530921-24532906
Length = 661
Score = 42.7 bits (96), Expect = 4e-05
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 32 YLFIYCCLYFMIKL-NIEDAASTFLYFGYTVIMVXXXXXXTGTIGFMACFWFV 187
Y+F+Y Y + L ++ S LY GY+ +M TGTIGF+ F FV
Sbjct: 599 YVFLYSINYLVFDLRSLSGPVSAMLYLGYSFLMAFAIMLATGTIGFLTSFSFV 651
>12_01_0486 +
3854889-3855014,3855897-3856089,3856206-3856310,
3856541-3856629,3856720-3856872,3857047-3857181,
3857293-3857459,3858193-3858287,3858495-3858868,
3859101-3859374,3859464-3859531
Length = 592
Score = 39.9 bits (89), Expect = 3e-04
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 14 SARGAGYLFIYCCLYFMIKLNIEDAASTFLYFGYTVIMVXXXXXXTGTIGFMACFWFVR 190
+A A Y+++Y Y+ +K + T YFGYT++ G IG++ FVR
Sbjct: 525 AASTALYVYLYSIYYYHVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAIGYLGSTLFVR 583
>08_01_0409 +
3625071-3625228,3625829-3625905,3626310-3626889,
3626974-3627111,3627318-3627387,3627449-3627933,
3628681-3628890,3629259-3629326,3629855-3629961,
3630275-3630346,3630448-3630614,3630709-3630820,
3631464-3631650,3632174-3632286
Length = 847
Score = 39.1 bits (87), Expect = 5e-04
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 32 YLFIYCCLYFMIKLNIEDAASTFLYFGYTVIMVXXXXXXTGTIGFMACFWFVR 190
++F YC Y+ + ++ T +FGY + GT+GF A FVR
Sbjct: 514 FIFFYCIYYYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASLLFVR 566
>02_05_0564 + 30003817-30005778
Length = 653
Score = 39.1 bits (87), Expect = 5e-04
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 32 YLFIYCCLYFMIKL-NIEDAASTFLYFGYTVIMVXXXXXXTGTIGFMACFWFV 187
Y+F+Y Y + L ++ S LY GY ++ TGT+GF+ F FV
Sbjct: 591 YVFLYSINYLVFDLRSLSGPVSATLYIGYAFVVSLAIMLATGTVGFLTSFSFV 643
>10_01_0062 -
818396-818538,819482-819693,819936-820420,820540-820696,
820787-820924,821127-821703,821978-822018,822679-822809
Length = 627
Score = 36.3 bits (80), Expect = 0.003
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 32 YLFIYCCLYFMIKLNIEDAASTFLYFGYTVIMVXXXXXXTGTIGFMACFWFVR 190
++F YC Y+ + ++ T +FGY + G +GF A FVR
Sbjct: 521 FVFAYCLYYYRERSDMSGFMQTSFFFGYMACICYAFFLMLGMVGFRAALLFVR 573
>03_02_0296 +
7191455-7191615,7192031-7192071,7192156-7192741,
7193307-7193444,7193572-7193728,7193848-7194332,
7194867-7195086
Length = 595
Score = 36.3 bits (80), Expect = 0.003
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 32 YLFIYCCLYFMIKLNIEDAASTFLYFGYTVIMVXXXXXXTGTIGFMACFWFVR 190
+++ YC Y+ + ++ T +FGY + G IGF A +FVR
Sbjct: 534 FVYGYCLYYYYARSDMSGFMQTSFFFGYMACICYAFFLMLGMIGFRAALFFVR 586
>11_01_0518 +
4057428-4057538,4059609-4059801,4059921-4060025,
4060259-4060347,4060424-4060576,4060754-4060888,
4061241-4061407,4062129-4062223,4062367-4062740,
4062903-4063176,4063806-4063822
Length = 570
Score = 33.1 bits (72), Expect = 0.032
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 14 SARGAGYLFIYCCLYFMIKLNIEDAASTFLYFGYTVIMVXXXXXXTGTI 160
+A A Y+++Y Y+ +K + T YFGYT++ GT+
Sbjct: 520 AASTALYVYLYSIYYYHVKTKMSGFFQTSFYFGYTLMFCLGLGILCGTV 568
>02_04_0195 +
20830849-20830950,20831498-20831690,20831800-20831904,
20832147-20832235,20832316-20832468,20832628-20832762,
20832849-20833015,20833519-20833613,20833707-20834080,
20834177-20834599
Length = 611
Score = 31.1 bits (67), Expect = 0.13
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 14 SARGAGYLFIYCCLYFMIKLNIEDAASTFLYFGYTVI 124
+A A Y+++Y Y+ +K + T YFGYT++
Sbjct: 517 AASTAVYVYLYSVYYYHVKTKMSGFFQTSFYFGYTLM 553
>07_03_1615 -
28157237-28157472,28157649-28157728,28157853-28158009,
28158379-28158565,28158646-28158772,28159218-28159805,
28159898-28160443,28161579-28161620,28162081-28162145,
28162273-28162377,28162682-28162741,28163149-28163237,
28163611-28163732,28163862-28163968,28164041-28164111,
28164377-28164470,28165010-28165247,28166112-28166347
Length = 1049
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +2
Query: 11 ISARGAGYLFIYCCLYFMIKLNIEDAASTF-----LYFGYTVIMV 130
+ +R F YCC+ F++ L + A TF LYFG + +V
Sbjct: 856 VESRFIKAFFFYCCITFLVYL-LTSAKQTFAIRGHLYFGLCITLV 899
>09_04_0285 +
16390786-16391291,16391370-16391957,16392034-16392160,
16392291-16392477,16392585-16392741,16392847-16393201
Length = 639
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = +2
Query: 38 FIYCCLYFMIKLNIEDAASTF-----LYFGYTVIMV 130
F YCC+ F+I + + A TF LYFG + ++
Sbjct: 442 FFYCCIVFLIYM-LTSAKQTFSIRGHLYFGLCITLL 476
>09_02_0406 -
8629287-8629304,8629384-8629865,8629977-8630291,
8630381-8630576
Length = 336
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1
Query: 174 QAMKPMVPVRRKNRK 130
+A KPM+ VRRKN+K
Sbjct: 170 RAAKPMMAVRRKNKK 184
>01_06_0100 -
26424769-26425545,26425666-26425697,26425778-26425894,
26426067-26426118,26426229-26426281,26426883-26427585
Length = 577
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 189 LTNQKQAMKPMVPVRRKNRKTMM 121
+ +K MK M+ +RRK ++TMM
Sbjct: 375 MMKKKMTMKRMMTMRRKMKRTMM 397
>05_03_0085 -
8271718-8272005,8272110-8272393,8273610-8274012,
8274792-8274816,8275686-8276149
Length = 487
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -3
Query: 109 EVQEGRGGIFDVQL 68
E+QEGRG FD+Q+
Sbjct: 149 ELQEGRGSYFDLQI 162
>04_03_0250 -
13477020-13477550,13477572-13477933,13478026-13478682,
13480142-13480232
Length = 546
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 192 LLTNQKQAMKPMVPVRRKNRK 130
LL A+KPM+ VRRK +K
Sbjct: 378 LLVISSTAVKPMMAVRRKKKK 398
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,690,746
Number of Sequences: 37544
Number of extensions: 38349
Number of successful extensions: 97
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 14,793,348
effective HSP length: 44
effective length of database: 13,141,412
effective search space used: 262828240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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