Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_J11
(195 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 1.3
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 1.3
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 1.3
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 20 3.1
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 18 9.4
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 18 9.4
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 18 9.4
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 18 9.4
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 18 9.4
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 18 9.4
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 18 9.4
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 18 9.4
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 18 9.4
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 18 9.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 18 9.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 18 9.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 18 9.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 18 9.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 18 9.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 18 9.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 18 9.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 18 9.4
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 18 9.4
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 1.3
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 101 LYFGYTVIMVXXXXXXTGTIGFMA 172
+Y G +MV T+G+MA
Sbjct: 285 VYLGTCFVMVFASLLEYATVGYMA 308
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 1.3
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 101 LYFGYTVIMVXXXXXXTGTIGFMA 172
+Y G +MV T+G+MA
Sbjct: 285 VYLGTCFVMVFASLLEYATVGYMA 308
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.0 bits (42), Expect = 1.3
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 101 LYFGYTVIMVXXXXXXTGTIGFMA 172
+Y G +MV T+G+MA
Sbjct: 224 VYLGTCFVMVFASLLEYATVGYMA 247
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 115 VTEVQEGRGGIFDVQLDHE 59
+ E+ +GRG IF+ D E
Sbjct: 47 LVEIFDGRGTIFEGHDDRE 65
Score = 18.6 bits (36), Expect = 7.1
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = +2
Query: 5 CGISARGAGYLFIYCCLYFMIKLN 76
CGI AG+ F + K N
Sbjct: 721 CGIQRFAAGFCFTVVYAALLTKTN 744
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +2
Query: 5 CGISARGAGYLFIYCCLYFMIKLNIED 85
CG G + LY + KLN +D
Sbjct: 134 CGPVMPQGGVQALEAMLYTLDKLNTQD 160
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 18.2 bits (35), Expect = 9.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 20 RGAGYLFIYCCLYFMIKLN 76
RGA YL+++ L +LN
Sbjct: 272 RGAQYLYLHQQLLARYELN 290
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 137 TGRP**RCNRSTGRSRRH 84
T R R R GRSR H
Sbjct: 62 TSRERSRDRRERGRSREH 79
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 137 TGRP**RCNRSTGRSRRH 84
T R R R GRSR H
Sbjct: 62 TSRERSRDRRERGRSREH 79
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 137 TGRP**RCNRSTGRSRRH 84
T R R R GRSR H
Sbjct: 62 TSRERSRDRRERGRSREH 79
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 137 TGRP**RCNRSTGRSRRH 84
T R R R GRSR H
Sbjct: 62 TSRERSRDRRERGRSREH 79
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 137 TGRP**RCNRSTGRSRRH 84
T R R R GRSR H
Sbjct: 62 TSRERSRDRRERGRSREH 79
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 137 TGRP**RCNRSTGRSRRH 84
T R R R GRSR H
Sbjct: 62 TSRERSRDRRERGRSREH 79
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 137 TGRP**RCNRSTGRSRRH 84
T R R R GRSR H
Sbjct: 62 TSRERSRDRRERGRSREH 79
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -1
Query: 168 MKPMVPVRRKNRKTMMT 118
M P R+KN+K + T
Sbjct: 22 MPETTPRRKKNKKPLPT 38
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 46 VDEEVTGTSC 17
VDE V GT C
Sbjct: 403 VDELVRGTKC 412
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 137 TGRP**RCNRSTGRSRRH 84
T R R R GRSR H
Sbjct: 311 TSRERSRDRRERGRSREH 328
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 137 TGRP**RCNRSTGRSRRH 84
T R R R GRSR H
Sbjct: 311 TSRERSRDRRERGRSREH 328
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 137 TGRP**RCNRSTGRSRRH 84
T R R R GRSR H
Sbjct: 311 TSRERSRDRRERGRSREH 328
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 137 TGRP**RCNRSTGRSRRH 84
T R R R GRSR H
Sbjct: 311 TSRERSRDRRERGRSREH 328
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 137 TGRP**RCNRSTGRSRRH 84
T R R R GRSR H
Sbjct: 311 TSRERSRDRRERGRSREH 328
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 137 TGRP**RCNRSTGRSRRH 84
T R R R GRSR H
Sbjct: 311 TSRERSRDRRERGRSREH 328
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 137 TGRP**RCNRSTGRSRRH 84
T R R R GRSR H
Sbjct: 310 TSRERSRDRRGRGRSREH 327
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 137 TGRP**RCNRSTGRSRRH 84
T R R R GRSR H
Sbjct: 311 TSRERSRDRRERGRSREH 328
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 37 EVTGTSCRYPA 5
E+T +SC Y A
Sbjct: 335 EITSSSCSYMA 345
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,267
Number of Sequences: 438
Number of extensions: 400
Number of successful extensions: 25
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used: 2541420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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