Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_J07
(358 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003139-2|AAB54165.1| 244|Caenorhabditis elegans Ribosomal pro... 60 3e-10
Z81519-2|CAB04217.1| 468|Caenorhabditis elegans Hypothetical pr... 29 0.95
Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical p... 28 2.2
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 27 2.9
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 27 2.9
AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical ... 27 2.9
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 27 3.9
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 27 3.9
AF036706-7|AAK39282.1| 562|Caenorhabditis elegans Hypothetical ... 27 3.9
AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical... 27 5.1
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 26 6.7
Z81522-1|CAB61004.1| 264|Caenorhabditis elegans Hypothetical pr... 26 6.7
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 26 6.7
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 26 6.7
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 26 6.7
U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical pr... 26 6.7
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 26 6.7
AC006631-2|AAL02500.1| 142|Caenorhabditis elegans Hypothetical ... 26 6.7
Z83228-3|CAB60998.1| 536|Caenorhabditis elegans Hypothetical pr... 26 8.9
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe... 26 8.9
AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical... 26 8.9
AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical ... 26 8.9
AF145377-1|AAD39816.1| 536|Caenorhabditis elegans MOM-4 protein. 26 8.9
AF143242-1|AAD37359.1| 536|Caenorhabditis elegans protein kinas... 26 8.9
>AF003139-2|AAB54165.1| 244|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 7 protein.
Length = 244
Score = 60.5 bits (140), Expect = 3e-10
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = +1
Query: 109 SKKLPAVPESVXXXXXXXXXXXXXXXQITLKRFSASIKKRKEICKRAEQYVKEYRIKERD 288
+KK+P VPE+V Q + + + +K+ + KRAE+YV+EYR +++
Sbjct: 4 TKKVPQVPETVLKRRKQRADARTKAAQHKVTVAAKNKEKKTQYFKRAEKYVQEYRNAQKE 63
Query: 289 EIRLARQARNRGNYYVPGEAKLA 357
+RL R+A +G++YVP E K+A
Sbjct: 64 GLRLKREAEAKGDFYVPAEHKVA 86
>Z81519-2|CAB04217.1| 468|Caenorhabditis elegans Hypothetical
protein F29C12.5 protein.
Length = 468
Score = 29.1 bits (62), Expect = 0.95
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 225 LLNGSGKPLECDLKTASSECL 163
L+ GSGKP+E L A ECL
Sbjct: 240 LIEGSGKPMEIRLDIAEKECL 260
>Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical
protein F36G9.1 protein.
Length = 356
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 294 DFITL-LDAVFFDILFGSLTDFFPLLNGSGKPLEC 193
DF++L FF ILFG+ +F L+NG+ L C
Sbjct: 295 DFLSLGYRLAFFIILFGAFCEFVSLINGTLHFLLC 329
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 305 LANLISSRSLMRYSLTYCSALLQISFLFLM 216
L N++++ S+ + YC + QI+ LFLM
Sbjct: 661 LLNVLAAYSMFNTEVGYCQGMSQIAALFLM 690
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 305 LANLISSRSLMRYSLTYCSALLQISFLFLM 216
L N++++ S+ + YC + QI+ LFLM
Sbjct: 661 LLNVLAAYSMFNTEVGYCQGMSQIAALFLM 690
>AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical
protein F56D12.6b protein.
Length = 951
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +1
Query: 190 ITLKRFSASIKKRKEICKRAEQYVKEYRIKERDEIRLARQARNRGNYYV 336
++LK ++KK +E Q+VKE E + ++ ++ N+ ++Y+
Sbjct: 1 MSLKVLQENLKKSEETVAEVAQFVKERLSVEDEYVKAINRSVNKVSHYI 49
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 202 RFSASIKKRKEICKRAEQYVKEYRIKERDEI 294
R +SI+++ E ++ +Q KEYR+K E+
Sbjct: 62 RVISSIEQKTEGSEKKQQLAKEYRVKVEQEL 92
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 202 RFSASIKKRKEICKRAEQYVKEYRIKERDEI 294
R +SI+++ E ++ +Q KEYR+K E+
Sbjct: 62 RVISSIEQKTEGSEKKQQLAKEYRVKVEQEL 92
>AF036706-7|AAK39282.1| 562|Caenorhabditis elegans Hypothetical
protein T07A9.10 protein.
Length = 562
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 202 RFSASIKKRKEICKRAEQYVKEY 270
RF + + EIC+R EQ +KE+
Sbjct: 181 RFQSDFAQSSEICQRVEQKLKEF 203
>AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical
protein Y53F4B.21 protein.
Length = 1099
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 190 ITLKRFSASIKKRKEICKRAEQYVKEYRIKERDE 291
I+ R +K+ KE C+ A ++ E++ K+RD+
Sbjct: 356 ISKDRADEMLKEVKEYCEHASTWMLEFQQKKRDQ 389
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 164 RHSELAVFRSHSRGFPLPLRRGKKSVREPNNMSKN 268
RH E +S SRG LPLR G+ V + S+N
Sbjct: 3491 RHQER--HQSESRGGTLPLRNGRSVVSLKSTQSQN 3523
>Z81522-1|CAB61004.1| 264|Caenorhabditis elegans Hypothetical
protein F15D3.1b protein.
Length = 264
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 164 RHSELAVFRSHSRGFPLPLRRGKKSVREPNNMSKN 268
RH E +S SRG LPLR G+ V + S+N
Sbjct: 81 RHQER--HQSESRGGTLPLRNGRSVVSLKSTQSQN 113
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 164 RHSELAVFRSHSRGFPLPLRRGKKSVREPNNMSKN 268
RH E +S SRG LPLR G+ V + S+N
Sbjct: 3491 RHQER--HQSESRGGTLPLRNGRSVVSLKSTQSQN 3523
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 202 RFSASIKKRKEICKRAEQYVKEYRIKERDEIR 297
R +SI+++ E ++ +Q KEYR K E+R
Sbjct: 62 RVISSIEQKTEGSEKKQQMAKEYREKVEKELR 93
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 202 RFSASIKKRKEICKRAEQYVKEYRIKERDEIR 297
R +SI+++ E ++ +Q KEYR K E+R
Sbjct: 62 RVISSIEQKTEGSEKKQQMAKEYREKVEKELR 93
>U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical
protein F41F3.8 protein.
Length = 118
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 132 RNSWQLLTVLFTLHRFFLGRSLLFC 58
R+ W LL ++ T+H F LG S C
Sbjct: 2 RSLWMLLMLIGTIHAFLLGGSGCGC 26
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 164 RHSELAVFRSHSRGFPLPLRRGKKSVREPNNMSKN 268
RH E +S SRG LPLR G+ V + S+N
Sbjct: 3491 RHQER--HQSESRGGTLPLRNGRSVVSLKSTQSQN 3523
>AC006631-2|AAL02500.1| 142|Caenorhabditis elegans Hypothetical
protein F27B3.7 protein.
Length = 142
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 233 KSVREPNNMSKNTASRSVMKSD 298
KS+ +P N+ NTA ++M SD
Sbjct: 39 KSMIDPQNLDDNTALEAIMNSD 60
>Z83228-3|CAB60998.1| 536|Caenorhabditis elegans Hypothetical
protein F52F12.3 protein.
Length = 536
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 192 DLKTASSECLPPFTVLQD*FRN 127
D++ SSEC+ FT+L+D + N
Sbjct: 291 DIRPTSSECVEYFTLLKDEYPN 312
>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying
defective protein 45 protein.
Length = 1076
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 220 KKRKEICKRAEQYVKEYRIKERDEI-RLARQARNRGNY 330
K+RKEI K+ E V Y EI R+ R+ + NY
Sbjct: 552 KRRKEILKKIEGQVTSYEKNRPTEIERIHRRKKMLENY 589
>AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical
protein Y18D10A.13 protein.
Length = 2417
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +2
Query: 167 HSELAVFRSHSRGFPLPLRRGKKSVREPNNMSKNTASRSVMKSDWQDR 310
H L F SH+ ++RG + + N+ + + +SVM + +R
Sbjct: 1427 HRSLLTFTSHAIRLECDIKRGFATFSDANSSHRFSIIQSVMNQSFNNR 1474
>AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical
protein protein.
Length = 2417
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +2
Query: 167 HSELAVFRSHSRGFPLPLRRGKKSVREPNNMSKNTASRSVMKSDWQDR 310
H L F SH+ ++RG + + N+ + + +SVM + +R
Sbjct: 1427 HRSLLTFTSHAIRLECDIKRGFATFSDANSSHRFSIIQSVMNQSFNNR 1474
>AF145377-1|AAD39816.1| 536|Caenorhabditis elegans MOM-4 protein.
Length = 536
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 192 DLKTASSECLPPFTVLQD*FRN 127
D++ SSEC+ FT+L+D + N
Sbjct: 291 DIRPTSSECVEYFTLLKDEYPN 312
>AF143242-1|AAD37359.1| 536|Caenorhabditis elegans protein kinase
MOM-4 protein.
Length = 536
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 192 DLKTASSECLPPFTVLQD*FRN 127
D++ SSEC+ FT+L+D + N
Sbjct: 291 DIRPTSSECVEYFTLLKDEYPN 312
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.131 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,193,372
Number of Sequences: 27780
Number of extensions: 157293
Number of successful extensions: 494
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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