Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_J07
         (358 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   3.3  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   3.3  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   4.4  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   4.4  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   4.4  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   4.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    20   7.6  

>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = +2

Query: 173 ELAVFRSHSRGFPLPLRRGKKSVREPNNMSKNTASRSVMKSDWQDRL 313
           EL +  SH+    L L R K   + P +  ++  S +       D+L
Sbjct: 65  ELYIKYSHTHEKKLVLERSKTKSKSPESRDRSNTSNTSKTFILSDKL 111


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 333 IIIATVTSLSCQSDFITLLDAVFFDILFGSLTDF 232
           + IA + + S  SDF  L+D    ++  GS+T++
Sbjct: 315 MFIADLNNQSTASDFKQLIDRWVANVPNGSVTNW 348


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 208 SASIKKRKEICKRAEQYVKEYRIKER 285
           S S  + +E  K+  QY K Y  KE+
Sbjct: 3   SCSRDRNREYRKKDRQYEKLYNEKEK 28


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 208 SASIKKRKEICKRAEQYVKEYRIKER 285
           S S  + +E  K+  QY K Y  KE+
Sbjct: 3   SCSRDRNREYRKKDRQYEKLYNEKEK 28


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 208 SASIKKRKEICKRAEQYVKEYRIKER 285
           S S  + +E  K+  QY K Y  KE+
Sbjct: 3   SCSRDRNREYRKKDRQYEKLYNEKEK 28


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 208 SASIKKRKEICKRAEQYVKEYRIKER 285
           S S  + +E  K+  QY K Y  KE+
Sbjct: 3   SCSRDRNREYRKKDRQYEKLYNEKEK 28


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -1

Query: 124 LATSYCPLYPSQVFSRPQPSFL*SQPSCCG 35
           L+T+  PL  + + ++ + +F    P+CCG
Sbjct: 339 LSTTVNPLLYNIMSNKFREAFKLMLPNCCG 368


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.131    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,469
Number of Sequences: 438
Number of extensions: 2285
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)