Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_J06
(286 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0217 - 1644696-1645034,1645143-1645214 126 3e-30
11_01_0348 - 2607315-2607424,2608634-2609030 124 8e-30
06_01_0428 + 3055163-3055573 124 8e-30
06_01_0427 - 3054204-3054614 124 8e-30
06_01_0423 - 3039527-3039937 124 8e-30
05_04_0449 - 21355439-21355849 124 8e-30
04_03_0909 + 20748653-20749063 124 8e-30
01_06_1456 + 37507156-37507566 124 8e-30
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 111 8e-26
12_02_0048 - 12852335-12852745 99 3e-22
12_02_0047 - 12836779-12837189 95 8e-21
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 89 7e-19
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 87 2e-18
06_01_0425 - 3045557-3046004,3046852-3046856 86 5e-18
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 75 1e-14
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 58 1e-09
01_01_1006 - 7972645-7973811 29 0.76
11_01_0128 - 1043053-1043151,1043238-1043570,1043588-1043707,104... 27 3.1
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 27 3.1
01_06_0541 - 30088910-30089107,30089421-30089477,30089563-300897... 27 3.1
01_01_1163 + 9258427-9258451,9258581-9258681,9258890-9258967,925... 27 3.1
08_02_0182 - 13930436-13931245,13931348-13931627,13931788-139323... 26 5.4
08_01_0704 + 6219530-6219609,6221595-6222243,6222339-6222437,622... 26 5.4
04_01_0146 + 1701744-1701860,1702036-1702112,1702247-1702344,170... 26 5.4
09_06_0019 + 20258844-20258988,20259870-20259974,20261027-202610... 25 7.1
07_03_0394 - 17633753-17636788 25 7.1
03_05_0495 - 24907659-24908747 25 7.1
02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033 25 7.1
01_06_1640 + 38836977-38836988,38837694-38838047,38838164-388382... 25 7.1
11_04_0377 + 16977586-16977843 25 9.4
05_04_0149 - 18441561-18442082,18442723-18442861,18443295-184433... 25 9.4
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 126 bits (304), Expect = 3e-30
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +3
Query: 96 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGFKKPHRYRPGTVALREIRRYQKSTE 275
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGG KKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 276 LLI 284
LLI
Sbjct: 61 LLI 63
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 124 bits (300), Expect = 8e-30
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +3
Query: 96 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGFKKPHRYRPGTVALREIRRYQKSTE 275
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGG KKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 276 LLI 284
LLI
Sbjct: 61 LLI 63
>06_01_0428 + 3055163-3055573
Length = 136
Score = 124 bits (300), Expect = 8e-30
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +3
Query: 96 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGFKKPHRYRPGTVALREIRRYQKSTE 275
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGG KKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 276 LLI 284
LLI
Sbjct: 61 LLI 63
>06_01_0427 - 3054204-3054614
Length = 136
Score = 124 bits (300), Expect = 8e-30
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +3
Query: 96 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGFKKPHRYRPGTVALREIRRYQKSTE 275
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGG KKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 276 LLI 284
LLI
Sbjct: 61 LLI 63
>06_01_0423 - 3039527-3039937
Length = 136
Score = 124 bits (300), Expect = 8e-30
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +3
Query: 96 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGFKKPHRYRPGTVALREIRRYQKSTE 275
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGG KKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 276 LLI 284
LLI
Sbjct: 61 LLI 63
>05_04_0449 - 21355439-21355849
Length = 136
Score = 124 bits (300), Expect = 8e-30
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +3
Query: 96 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGFKKPHRYRPGTVALREIRRYQKSTE 275
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGG KKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 276 LLI 284
LLI
Sbjct: 61 LLI 63
>04_03_0909 + 20748653-20749063
Length = 136
Score = 124 bits (300), Expect = 8e-30
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +3
Query: 96 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGFKKPHRYRPGTVALREIRRYQKSTE 275
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGG KKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 276 LLI 284
LLI
Sbjct: 61 LLI 63
>01_06_1456 + 37507156-37507566
Length = 136
Score = 124 bits (300), Expect = 8e-30
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +3
Query: 96 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGFKKPHRYRPGTVALREIRRYQKSTE 275
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGG KKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 276 LLI 284
LLI
Sbjct: 61 LLI 63
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 111 bits (267), Expect = 8e-26
Identities = 60/77 (77%), Positives = 62/77 (80%), Gaps = 14/77 (18%)
Frame = +3
Query: 96 MARTKQTARKSTGGKAPRKQLATK--------------AARKSAPSTGGFKKPHRYRPGT 233
MARTKQTARKSTGGKAPRKQLATK AARKSAP+TGG KKPHRYRPGT
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKSDFDRWSYITISVQAARKSAPTTGGVKKPHRYRPGT 60
Query: 234 VALREIRRYQKSTELLI 284
VALREIR+YQKSTELLI
Sbjct: 61 VALREIRKYQKSTELLI 77
>12_02_0048 - 12852335-12852745
Length = 136
Score = 99 bits (238), Expect = 3e-22
Identities = 47/63 (74%), Positives = 51/63 (80%)
Frame = +3
Query: 96 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGFKKPHRYRPGTVALREIRRYQKSTE 275
MARTKQTA+KST PRK L K ARKSAP+ G KKPHR++PGTVALREIR YQKSTE
Sbjct: 1 MARTKQTAKKSTASNVPRKLLVMKVARKSAPTMAGLKKPHRFKPGTVALREIRTYQKSTE 60
Query: 276 LLI 284
LLI
Sbjct: 61 LLI 63
>12_02_0047 - 12836779-12837189
Length = 136
Score = 95.1 bits (226), Expect = 8e-21
Identities = 46/63 (73%), Positives = 48/63 (76%)
Frame = +3
Query: 96 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGFKKPHRYRPGTVALREIRRYQKSTE 275
MARTKQTA+KST G PRK L K ARKSAP G KKPHR+ P VALREIR YQKSTE
Sbjct: 1 MARTKQTAKKSTAGNVPRKLLVMKVARKSAPMMAGLKKPHRFNPWIVALREIRTYQKSTE 60
Query: 276 LLI 284
LLI
Sbjct: 61 LLI 63
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 88.6 bits (210), Expect = 7e-19
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 96 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGFKKPHRYRP 227
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGG KKPHRY P
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYPP 44
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 87.4 bits (207), Expect = 2e-18
Identities = 49/73 (67%), Positives = 53/73 (72%), Gaps = 10/73 (13%)
Frame = +3
Query: 96 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGF----------KKPHRYRPGTVALR 245
MARTKQTARKSTGGKAPRK L AA APS+ G KKP R+RPGTVALR
Sbjct: 66 MARTKQTARKSTGGKAPRKPLRAIAAVMPAPSSRGVARKSVPFIGVKKPRRHRPGTVALR 125
Query: 246 EIRRYQKSTELLI 284
EIR+YQK+TELLI
Sbjct: 126 EIRKYQKNTELLI 138
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 85.8 bits (203), Expect = 5e-18
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = +3
Query: 147 RKQLATKAARKSAPSTGGFKKPHRYRPGTVALREIRRYQKSTELLI 284
RKQLATKA KSAP+TGG KKPHR+RPGTVALREIR+YQKSTELLI
Sbjct: 32 RKQLATKATCKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLI 77
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 74.5 bits (175), Expect = 1e-14
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = +3
Query: 168 AARKSAPSTGGFKKPHRYRPGTVALREIRRYQKSTELLI 284
AARKSAP GG KKPHRYRPGTVALREIR+YQK+TELLI
Sbjct: 4 AARKSAPCIGGVKKPHRYRPGTVALREIRKYQKNTELLI 42
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 58.0 bits (134), Expect = 1e-09
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 8/71 (11%)
Frame = +3
Query: 96 MARTKQTARKSTGGKAPRKQLATKAARKS-APSTGGF-------KKPHRYRPGTVALREI 251
MARTK A + + + +K ++ R S A GG +KPHR+RPGTVALREI
Sbjct: 1 MARTKHPAVRKSKAEPKKKLQFERSPRPSKAQRAGGTPRQQTKQRKPHRFRPGTVALREI 60
Query: 252 RRYQKSTELLI 284
R++QK+TELLI
Sbjct: 61 RKFQKTTELLI 71
>01_01_1006 - 7972645-7973811
Length = 388
Score = 28.7 bits (61), Expect = 0.76
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -1
Query: 229 PGR*RWGFLNPPVLGADFRAALVANCLRGAL--PPVDLRAVCFVRA 98
PG + FL+ V G D RA V C A+ PP+ + FVRA
Sbjct: 333 PGEVAYFFLHSRVFGVDLRACSVLECEFFAMLNPPMRYHSSRFVRA 378
>11_01_0128 -
1043053-1043151,1043238-1043570,1043588-1043707,
1043810-1043993,1044088-1044275,1044714-1044808,
1044884-1045003,1045232-1045350,1052717-1052799,
1052892-1053071
Length = 506
Score = 26.6 bits (56), Expect = 3.1
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -1
Query: 208 FLNPPVLGADFRAALVANCLRGALPPV-DLRA-VCFVRAIIHFS 83
+L+PP L ADF +A LR LPP DL++ + +IH S
Sbjct: 330 YLDPP-LKADFNEQCLAEHLREVLPPAKDLQSWKMVIVPVIHHS 372
>02_05_1052 +
33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 114 TARKSTGGKAPRKQLATKAARKSAPSTGGFKKPHRYRPGTVALR 245
T+ ++ G +PR++LA+ ST K HR + ALR
Sbjct: 737 TSSMASRGTSPRRRLASDGVNALLKSTDFTDKDHRPSTSSAALR 780
>01_06_0541 -
30088910-30089107,30089421-30089477,30089563-30089721,
30090639-30090777,30090863-30091247,30091612-30091816
Length = 380
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 99 ARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGFKKPHRYR 224
A+ A K AP Q A +A APS GGF + R R
Sbjct: 49 AQAASAAAKFPTKPAPPTQAAREARGGGAPSRGGFGRGERGR 90
>01_01_1163 +
9258427-9258451,9258581-9258681,9258890-9258967,
9259625-9259765,9260263-9260329,9261039-9261193,
9261285-9261386,9262022-9262141,9262688-9262855
Length = 318
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 156 LATKAARKSAPSTGGFKKPHRYRPGTVALREIRRYQKS 269
+A+ AR APS+GG +P R G ++ R R Q +
Sbjct: 228 IASFFARIFAPSSGGSSRPSRSLVGNMSSRTSRAVQNN 265
>08_02_0182 -
13930436-13931245,13931348-13931627,13931788-13932324,
13932482-13932579,13932678-13933118
Length = 721
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 157 WLLKRRENRHPVLVDLRNPIVIA 225
WLL RR R +L D+ P+V+A
Sbjct: 598 WLLSRRYPRSALLRDINLPLVLA 620
>08_01_0704 +
6219530-6219609,6221595-6222243,6222339-6222437,
6222521-6222616,6222750-6222848,6222929-6223027,
6223811-6223882,6224508-6224597,6225173-6227329
Length = 1146
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 141 APRKQLATKAARKSAPSTGGFKKPHRYRPGTVALREIRRYQKSTELLI 284
APR++ + RK PS GG K H+ P + +R + L I
Sbjct: 493 APREKKSFPRKRKQ-PSAGGKPKKHKIVPAKMVAMPVRASPRLASLKI 539
>04_01_0146 +
1701744-1701860,1702036-1702112,1702247-1702344,
1704073-1704228,1704671-1705290,1705397-1705458,
1705551-1705941,1706404-1706575,1706686-1707212
Length = 739
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 117 ARKSTGGKAPRKQLATKAARKSAPSTGGFKKPHRYRPGT---VALREIRRYQKSTEL 278
AR GG+ +++T ++R +P F KP PG+ A+++ ++Q T +
Sbjct: 477 ARTWVGGEVLAPKISTFSSRGPSPLLPQFLKPDVAAPGSNILAAVKDSYKFQSGTSM 533
>09_06_0019 +
20258844-20258988,20259870-20259974,20261027-20261097,
20261658-20261714,20262661-20262849,20263096-20263119
Length = 196
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 103 RAIIHFSELLKSINYIKLY*NWIYKQIP 20
+A+ + K+I+Y KL +W+Y ++P
Sbjct: 104 KALYQNKTVWKAIDYEKLVNSWLYNELP 131
>07_03_0394 - 17633753-17636788
Length = 1011
Score = 25.4 bits (53), Expect = 7.1
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +1
Query: 163 LKRRENRHPVL---VDLRNPIVIALVL*RFEKFVAIKNLRSC 279
L RR + PVL DLR P +I L + +KF A LR C
Sbjct: 525 LPRRADHKPVLPAWFDLRRPGLIDLNQLKEDKFYAKVQLRIC 566
>03_05_0495 - 24907659-24908747
Length = 362
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 210 PHRYRPGTVALREIRRYQKS 269
PH YRPG V+ I+ +KS
Sbjct: 312 PHTYRPGEVSASLIKELRKS 331
>02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033
Length = 1614
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 150 KQLATKAARKSAPSTGGFKKPHRYRPGTVALREIRRYQKST 272
K +A AA KS+P G K +PG + KST
Sbjct: 451 KPVAADAAAKSSPVISGSSKLQHMQPGNAVTNLKEQPSKST 491
>01_06_1640 +
38836977-38836988,38837694-38838047,38838164-38838294,
38838554-38838860,38839036-38839349,38839507-38839645
Length = 418
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = -3
Query: 206 LKSTSTGCRFSRRFSSQLFARSFTSCRFT---GCLLC 105
LKS+ CRF +L R F++C+ GC C
Sbjct: 311 LKSSQAVCRFPACKGIELLLRHFSACKMRVPGGCANC 347
>11_04_0377 + 16977586-16977843
Length = 85
Score = 25.0 bits (52), Expect = 9.4
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 133 EVKLLANNWLLKRRENRHPVLVDLRNPIVIALVL*RFEKFVAIKNLRS 276
E+KL+ + + RR N + VD+ + +A+V R I+ LRS
Sbjct: 31 EIKLIVCDLMSGRRNNVDDLTVDILQDVQMAIVKYRLGIRKRIRELRS 78
>05_04_0149 -
18441561-18442082,18442723-18442861,18443295-18443352,
18443630-18443664,18444528-18444886,18445304-18445450,
18445849-18447954,18448300-18448494,18448629-18448709,
18448758-18448874,18449281-18449370,18449466-18449552,
18450293-18450315,18450675-18450804
Length = 1362
Score = 25.0 bits (52), Expect = 9.4
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = -3
Query: 284 DQQLRRFLIATNFSKRYSTRAITMGFLKSTSTGCRFSRRFSSQLFARSFTSCRFTGCLLC 105
D+Q+R + NF+ G +S +GCR F+ + + +C C C
Sbjct: 704 DKQVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLP--FNLRRKRHNCYNCALVFCHAC 761
Query: 104 TCHYSLQ 84
+ SL+
Sbjct: 762 SSKKSLK 768
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,429,823
Number of Sequences: 37544
Number of extensions: 133922
Number of successful extensions: 366
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 291966432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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