Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_J05
         (269 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   0.86 
AY330176-1|AAQ16282.1|  179|Anopheles gambiae odorant-binding pr...    24   1.1  
AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding pr...    24   1.1  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 179 LAQKKANETKEDV*GLRIRLSDLQKNILK 265
           LAQ    +TKE++  L  ++  LQK I++
Sbjct: 731 LAQTSFQQTKEEIEELNKKIETLQKTIVE 759


>AY330176-1|AAQ16282.1|  179|Anopheles gambiae odorant-binding
          protein AgamOBP49 protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 56 LYSPFLMLNLHLVPNS 9
          L+  FL+L LHL+P S
Sbjct: 8  LFRSFLLLTLHLLPQS 23


>AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding
          protein OBPjj6b protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 56 LYSPFLMLNLHLVPNS 9
          L+  FL+L LHL+P S
Sbjct: 8  LFRSFLLLTLHLLPQS 23


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,981
Number of Sequences: 2352
Number of extensions: 3160
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 15293985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)