Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_J05
         (269 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY057373-1|AAL25821.1|  481|Drosophila melanogaster innexin6 pro...    27   2.7  
AE014298-3002|AAF50922.1|  481|Drosophila melanogaster CG17063-P...    27   2.7  
AY047520-1|AAK77252.1|  367|Drosophila melanogaster GH02855p pro...    27   4.7  
AE014297-3727|AAF56405.2|  367|Drosophila melanogaster CG10238-P...    27   4.7  

>AY057373-1|AAL25821.1|  481|Drosophila melanogaster innexin6
           protein.
          Length = 481

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 220 LNIFFCFIGFFLRQFCFRGYWNKITFSCVNVTV 122
           LN+F   + F+L    F G+W K   +   + V
Sbjct: 222 LNVFISILNFWLMDVVFNGFWYKYIHALAAIPV 254


>AE014298-3002|AAF50922.1|  481|Drosophila melanogaster CG17063-PA
           protein.
          Length = 481

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 220 LNIFFCFIGFFLRQFCFRGYWNKITFSCVNVTV 122
           LN+F   + F+L    F G+W K   +   + V
Sbjct: 222 LNVFISILNFWLMDVVFNGFWYKYIHALAAIPV 254


>AY047520-1|AAK77252.1|  367|Drosophila melanogaster GH02855p
           protein.
          Length = 367

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 9/24 (37%), Positives = 19/24 (79%)
 Frame = -1

Query: 248 ANLRDVYVNLKHLLLFHWLFSAPV 177
           ++LR  +++LKH++++H L + PV
Sbjct: 65  SDLRSKWLDLKHIVIYHRLGTVPV 88


>AE014297-3727|AAF56405.2|  367|Drosophila melanogaster CG10238-PA
           protein.
          Length = 367

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 9/24 (37%), Positives = 19/24 (79%)
 Frame = -1

Query: 248 ANLRDVYVNLKHLLLFHWLFSAPV 177
           ++LR  +++LKH++++H L + PV
Sbjct: 65  SDLRSKWLDLKHIVIYHRLGTVPV 88


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,051,135
Number of Sequences: 53049
Number of extensions: 132507
Number of successful extensions: 284
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 24,988,368
effective HSP length: 68
effective length of database: 21,381,036
effective search space used: 449001756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)