Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_J03
(155 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 87 7e-18
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 87 7e-18
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 87 7e-18
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 87 7e-18
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 87 7e-18
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 87 7e-18
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 87 7e-18
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 87 7e-18
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 87 7e-18
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 87 7e-18
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 87 7e-18
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 87 7e-18
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 87 7e-18
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 87 7e-18
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 87 7e-18
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 87 7e-18
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +2
Query: 2 RKDWYDVKAPSMFTKRQVGTTLVNRTQATKIASEGLKGRVFEVSLADLQAD 154
+KDWYDVKAP+MF R +G TLV RTQ TKIAS+GLKGRVFEVSLADLQ D
Sbjct: 27 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND 77
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,683,893
Number of Sequences: 237096
Number of extensions: 452126
Number of successful extensions: 1039
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 76,859,062
effective HSP length: 31
effective length of database: 69,509,086
effective search space used: 1390181720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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