Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_J02
         (330 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    23   2.3  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   3.9  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   3.9  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    22   6.9  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    22   6.9  
AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450 CY...    21   9.1  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 145 SKWFPLPDHHC 113
           SKW+P   HHC
Sbjct: 98  SKWYPEIKHHC 108


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 139 WFPLPDHHC 113
           WFP  D HC
Sbjct: 154 WFPFDDQHC 162


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 139 WFPLPDHHC 113
           WFP  D HC
Sbjct: 154 WFPFDDQHC 162


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 163 EHPVPPSKWFPLPDHH 116
           E  +P   WFP+  HH
Sbjct: 161 ERRLPVPAWFPVDYHH 176


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 196 HDDPRIILEIYEHPVPPSKW 137
           H D  ++ E+Y HP     W
Sbjct: 27  HADVILVSELYRHPPNNGNW 46


>AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450
           CYP6Z1 protein.
          Length = 494

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 319 CSLKIYSSYGAGVRRNTG 266
           C+  ++  YGAG   +TG
Sbjct: 289 CAANVFLFYGAGADTSTG 306


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 358,039
Number of Sequences: 2352
Number of extensions: 7594
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)