Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_J02
(330 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23 p... 163 1e-40
X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein pr... 163 2e-40
X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17 pro... 163 2e-40
BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein. 163 2e-40
BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23 p... 163 2e-40
BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23 p... 163 2e-40
BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal pr... 163 2e-40
AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23 p... 163 2e-40
BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein. 59 4e-09
BC101482-1|AAI01483.1| 655|Homo sapiens hypothetical protein LO... 29 3.5
BC065706-1|AAH65706.1| 564|Homo sapiens C12orf51 protein protein. 29 3.5
AK091473-1|BAC03671.1| 655|Homo sapiens protein ( Homo sapiens ... 29 3.5
BC011924-1|AAH11924.1| 277|Homo sapiens unkempt-like protein. 28 6.0
AL032819-2|CAM26346.1| 277|Homo sapiens unkempt-like (Drosophil... 28 6.0
AL032819-1|CAM26345.1| 332|Homo sapiens unkempt-like (Drosophil... 28 6.0
AL031721-4|CAM26441.1| 277|Homo sapiens unkempt-like (Drosophil... 28 6.0
AL031721-3|CAM26440.1| 332|Homo sapiens unkempt-like (Drosophil... 28 6.0
AE006467-5|AAK61279.1| 756|Homo sapiens Ce protein similar to D... 28 6.0
>BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 163 bits (396), Expect = 1e-40
Identities = 75/86 (87%), Positives = 81/86 (94%)
Frame = +2
Query: 14 EGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVI 193
+GRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVI
Sbjct: 46 KGRLNRLPAAGVGDMVMATVKKGKPELRKKVRPAVVIRQRKSYRRKDGVFLYFEDNAGVI 105
Query: 194 VNNNVEMKGSAITGPVAKECADLWPR 271
VNN EMKGSAITGPVAKECADLWPR
Sbjct: 106 VNNKGEMKGSAITGPVAKECADLWPR 131
>X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein
protein.
Length = 140
Score = 163 bits (395), Expect = 2e-40
Identities = 75/86 (87%), Positives = 81/86 (94%)
Frame = +2
Query: 14 EGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVI 193
+GRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVI
Sbjct: 46 KGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVI 105
Query: 194 VNNNVEMKGSAITGPVAKECADLWPR 271
VNN EMKGSAITGPVAKECADLWPR
Sbjct: 106 VNNKGEMKGSAITGPVAKECADLWPR 131
>X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17
protein.
Length = 140
Score = 163 bits (395), Expect = 2e-40
Identities = 75/86 (87%), Positives = 81/86 (94%)
Frame = +2
Query: 14 EGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVI 193
+GRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVI
Sbjct: 46 KGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVI 105
Query: 194 VNNNVEMKGSAITGPVAKECADLWPR 271
VNN EMKGSAITGPVAKECADLWPR
Sbjct: 106 VNNKGEMKGSAITGPVAKECADLWPR 131
>BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein.
Length = 140
Score = 163 bits (395), Expect = 2e-40
Identities = 75/86 (87%), Positives = 81/86 (94%)
Frame = +2
Query: 14 EGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVI 193
+GRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVI
Sbjct: 46 KGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVI 105
Query: 194 VNNNVEMKGSAITGPVAKECADLWPR 271
VNN EMKGSAITGPVAKECADLWPR
Sbjct: 106 VNNKGEMKGSAITGPVAKECADLWPR 131
>BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 163 bits (395), Expect = 2e-40
Identities = 75/86 (87%), Positives = 81/86 (94%)
Frame = +2
Query: 14 EGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVI 193
+GRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVI
Sbjct: 46 KGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVI 105
Query: 194 VNNNVEMKGSAITGPVAKECADLWPR 271
VNN EMKGSAITGPVAKECADLWPR
Sbjct: 106 VNNKGEMKGSAITGPVAKECADLWPR 131
>BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 163 bits (395), Expect = 2e-40
Identities = 75/86 (87%), Positives = 81/86 (94%)
Frame = +2
Query: 14 EGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVI 193
+GRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVI
Sbjct: 46 KGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVI 105
Query: 194 VNNNVEMKGSAITGPVAKECADLWPR 271
VNN EMKGSAITGPVAKECADLWPR
Sbjct: 106 VNNKGEMKGSAITGPVAKECADLWPR 131
>BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal
protein L23 protein.
Length = 134
Score = 163 bits (395), Expect = 2e-40
Identities = 75/86 (87%), Positives = 81/86 (94%)
Frame = +2
Query: 14 EGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVI 193
+GRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVI
Sbjct: 40 KGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVI 99
Query: 194 VNNNVEMKGSAITGPVAKECADLWPR 271
VNN EMKGSAITGPVAKECADLWPR
Sbjct: 100 VNNKGEMKGSAITGPVAKECADLWPR 125
>AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 163 bits (395), Expect = 2e-40
Identities = 75/86 (87%), Positives = 81/86 (94%)
Frame = +2
Query: 14 EGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVI 193
+GRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVI
Sbjct: 46 KGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVI 105
Query: 194 VNNNVEMKGSAITGPVAKECADLWPR 271
VNN EMKGSAITGPVAKECADLWPR
Sbjct: 106 VNNKGEMKGSAITGPVAKECADLWPR 131
>BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein.
Length = 77
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +2
Query: 14 EGRLNRLPAAGSGDMIVATVKKGKPELRKK 103
+GRLNRLPAAG GDM++ATVKKGKPELRKK
Sbjct: 46 KGRLNRLPAAGVGDMVMATVKKGKPELRKK 75
>BC101482-1|AAI01483.1| 655|Homo sapiens hypothetical protein
LOC283450 protein.
Length = 655
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 177 SSKYMNTPSRLLNGFRCLITTAGITFFLSSGLPFL 73
S + NTP + + GF C + + +S GLPFL
Sbjct: 497 SGREHNTPDKAMWGFACTVRAQESSEDVSGGLPFL 531
>BC065706-1|AAH65706.1| 564|Homo sapiens C12orf51 protein protein.
Length = 564
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 177 SSKYMNTPSRLLNGFRCLITTAGITFFLSSGLPFL 73
S + NTP + + GF C + + +S GLPFL
Sbjct: 495 SGREHNTPDKAMWGFACTVRAQESSEDVSGGLPFL 529
>AK091473-1|BAC03671.1| 655|Homo sapiens protein ( Homo sapiens
cDNA FLJ34154 fis, clone FCBBF3013058. ).
Length = 655
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 177 SSKYMNTPSRLLNGFRCLITTAGITFFLSSGLPFL 73
S + NTP + + GF C + + +S GLPFL
Sbjct: 497 SGREHNTPDKAMWGFACTVRAQESSEDVSGGLPFL 531
>BC011924-1|AAH11924.1| 277|Homo sapiens unkempt-like protein.
Length = 277
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 125 RQRKPFRRRDGVFIYFED 178
R+R+P RRRDG F Y D
Sbjct: 61 RRRRPLRRRDGTFNYSPD 78
>AL032819-2|CAM26346.1| 277|Homo sapiens unkempt-like (Drosophila)
protein.
Length = 277
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 125 RQRKPFRRRDGVFIYFED 178
R+R+P RRRDG F Y D
Sbjct: 61 RRRRPLRRRDGTFNYSPD 78
>AL032819-1|CAM26345.1| 332|Homo sapiens unkempt-like (Drosophila)
protein.
Length = 332
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 125 RQRKPFRRRDGVFIYFED 178
R+R+P RRRDG F Y D
Sbjct: 61 RRRRPLRRRDGTFNYSPD 78
>AL031721-4|CAM26441.1| 277|Homo sapiens unkempt-like (Drosophila)
protein.
Length = 277
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 125 RQRKPFRRRDGVFIYFED 178
R+R+P RRRDG F Y D
Sbjct: 61 RRRRPLRRRDGTFNYSPD 78
>AL031721-3|CAM26440.1| 332|Homo sapiens unkempt-like (Drosophila)
protein.
Length = 332
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 125 RQRKPFRRRDGVFIYFED 178
R+R+P RRRDG F Y D
Sbjct: 61 RRRRPLRRRDGTFNYSPD 78
>AE006467-5|AAK61279.1| 756|Homo sapiens Ce protein similar to Dm
Cys3His finger protein protein.
Length = 756
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 125 RQRKPFRRRDGVFIYFED 178
R+R+P RRRDG F Y D
Sbjct: 61 RRRRPLRRRDGTFNYSPD 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,618,667
Number of Sequences: 237096
Number of extensions: 1111879
Number of successful extensions: 5902
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5902
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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