Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_J01
(231 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 93 9e-22
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 93 9e-22
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 93 9e-22
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 88 4e-20
AY146722-1|AAO12082.1| 107|Anopheles gambiae odorant-binding pr... 24 0.79
AY146720-1|AAO12080.1| 147|Anopheles gambiae odorant-binding pr... 24 0.79
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 23 1.4
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 22 2.4
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 22 2.4
AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding pr... 22 2.4
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 21 4.2
AY973196-1|AAY41590.1| 94|Anopheles gambiae defensin 4 protein. 21 5.6
U43499-1|AAA93302.1| 278|Anopheles gambiae a-emp protein. 21 7.4
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 93.5 bits (222), Expect = 9e-22
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 93.5 bits (222), Expect = 9e-22
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 93.5 bits (222), Expect = 9e-22
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 87.8 bits (208), Expect = 4e-20
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCD++ ALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>AY146722-1|AAO12082.1| 107|Anopheles gambiae odorant-binding
protein AgamOBP16 protein.
Length = 107
Score = 23.8 bits (49), Expect = 0.79
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 63 NKLTCYCTASVTLHNVTAPS 4
++L CY LHNVT P+
Sbjct: 63 HELQCYMYCMFRLHNVTRPN 82
>AY146720-1|AAO12080.1| 147|Anopheles gambiae odorant-binding
protein AgamOBP15 protein.
Length = 147
Score = 23.8 bits (49), Expect = 0.79
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 63 NKLTCYCTASVTLHNVTAPS 4
++L CY LHNVT P+
Sbjct: 63 HELQCYMYCMFRLHNVTRPN 82
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.0 bits (47), Expect = 1.4
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -3
Query: 217 RSPHDRGTYGAGSVVSRETGFAHSGPIVYDQR 122
RS H TY G + G + GP QR
Sbjct: 216 RSDHQLITYSVGEAEQQSRGLSTGGPSAGRQR 247
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 174 TTLPAPYVPRSWGDL 218
TT PAP +W DL
Sbjct: 196 TTTPAPTTTTTWSDL 210
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 174 TTLPAPYVPRSWGDL 218
TT PAP +W DL
Sbjct: 196 TTTPAPTTTTTWSDL 210
>AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding
protein AgamOBP55 protein.
Length = 156
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 95 FTMCDEEVAALVVDNGSGMC 154
+ +C E+ A +DNG+ MC
Sbjct: 42 YRVCHEQHATPQMDNGTVMC 61
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 21.4 bits (43), Expect = 4.2
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 141 GPECAKPVSRETTLPAP 191
G C+KP TT P P
Sbjct: 776 GSRCSKPSVTSTTPPTP 792
>AY973196-1|AAY41590.1| 94|Anopheles gambiae defensin 4 protein.
Length = 94
Score = 21.0 bits (42), Expect = 5.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 106 RRGSCRVGR 132
RRGSC +GR
Sbjct: 80 RRGSCTIGR 88
>U43499-1|AAA93302.1| 278|Anopheles gambiae a-emp protein.
Length = 278
Score = 20.6 bits (41), Expect = 7.4
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3
Query: 42 YNSKLIYLFNRTI 80
YN K +Y+FN +
Sbjct: 31 YNQKRVYIFNEDL 43
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,157
Number of Sequences: 2352
Number of extensions: 3695
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 10600200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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