Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_J01
(231 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 92 4e-20
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 92 4e-20
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 92 4e-20
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 92 4e-20
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 92 4e-20
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 92 4e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 92 4e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 92 4e-20
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 91 1e-19
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 91 1e-19
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 91 1e-19
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 89 3e-19
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 86 4e-18
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 54 2e-08
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 44 2e-05
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 42 4e-05
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 36 0.003
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 33 0.027
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 0.34
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 29 0.59
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 0.59
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 29 0.59
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 0.59
AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical ... 26 4.1
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 26 4.1
Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z49130-4|CAA88969.1| 280|Caenorhabditis elegans Hypothetical pr... 25 7.2
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 25 7.2
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 25 7.2
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 25 7.2
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 25 7.2
Z81586-13|CAN86915.1| 563|Caenorhabditis elegans Hypothetical p... 25 9.5
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 25 9.5
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 25 9.5
U20861-5|AAT92079.1| 256|Caenorhabditis elegans Temporarily ass... 25 9.5
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 25 9.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 25 9.5
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 92.3 bits (219), Expect = 4e-20
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 92.3 bits (219), Expect = 4e-20
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 92.3 bits (219), Expect = 4e-20
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 92.3 bits (219), Expect = 4e-20
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 92.3 bits (219), Expect = 4e-20
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 92.3 bits (219), Expect = 4e-20
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 92.3 bits (219), Expect = 4e-20
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 92.3 bits (219), Expect = 4e-20
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 91.1 bits (216), Expect = 1e-19
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCD++VAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 91.1 bits (216), Expect = 1e-19
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCD++VAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 91.1 bits (216), Expect = 1e-19
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCD++VAALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 89.4 bits (212), Expect = 3e-19
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
MCD++VAAL++DNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 85.8 bits (203), Expect = 4e-18
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +2
Query: 107 DEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQG 229
+EE+AALVVDNGSGMCKAGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 53.6 bits (123), Expect = 2e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 155 KAGFAGDDAPRAVCPSIVGRPRHQG 229
+AGFAGDDAPRAV PSIVGRPRHQG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 43.6 bits (98), Expect = 2e-05
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRH 223
+V+DNGSG+ KAGFAG+ P+ + VGRP++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 42.3 bits (95), Expect = 4e-05
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVCPSIVGRP 217
+VVDNG+G K G+AG + P + PS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 36.3 bits (80), Expect = 0.003
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIV 208
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 33.1 bits (72), Expect = 0.027
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVCPSIV 208
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 0.34
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 231 TPW*RGRPTIEGHTARGASSPAKPALHIPDPL 136
TP RGRP I ++ P P PDPL
Sbjct: 341 TPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.7 bits (61), Expect = 0.59
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1
Query: 219 RGRPTIEGHTARGASSPAKPALHIPDPLSTTNAATSS 109
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 641 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.7 bits (61), Expect = 0.59
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1
Query: 219 RGRPTIEGHTARGASSPAKPALHIPDPLSTTNAATSS 109
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.7 bits (61), Expect = 0.59
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1
Query: 219 RGRPTIEGHTARGASSPAKPALHIPDPLSTTNAATSS 109
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.7 bits (61), Expect = 0.59
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1
Query: 219 RGRPTIEGHTARGASSPAKPALHIPDPLSTTNAATSS 109
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical
protein W09B6.1b protein.
Length = 813
Score = 25.8 bits (54), Expect = 4.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 127 QRGNFLVAHCELVF 86
Q G F+V HCE+V+
Sbjct: 645 QNGEFMVTHCEIVY 658
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 25.8 bits (54), Expect = 4.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 127 QRGNFLVAHCELVF 86
Q G F+V HCE+V+
Sbjct: 645 QNGEFMVTHCEIVY 658
>Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical
protein W09D10.1 protein.
Length = 495
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -1
Query: 219 RGRPTIEGHTARGASSPAKPALHIPDPLSTTNAATSSSHIVN*F 88
RG + GH+ A++ A L DP ++T A + ++ + F
Sbjct: 163 RGSSSSNGHSTASAAAAAPSLLDFSDPPASTTPAKKAVNLFDDF 206
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 131 VDNGSGMCKAGFAGDDAPRAVC 196
++NG +C+AG+ G D VC
Sbjct: 1419 LNNGVCVCRAGWVGTDCSTPVC 1440
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 131 VDNGSGMCKAGFAGDDAPRAVC 196
++NG +C+AG+ G D VC
Sbjct: 1419 LNNGVCVCRAGWVGTDCSTPVC 1440
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 131 VDNGSGMCKAGFAGDDAPRAVC 196
++NG +C+AG+ G D VC
Sbjct: 1419 LNNGVCVCRAGWVGTDCSTPVC 1440
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 95 FTMCDEEVAALVVDNGSGMCKAGFAGDDAPRAV 193
F++ E+ V G +C +GF G D P V
Sbjct: 350 FSLKGEDYVLKVSQGGKTICLSGFMGIDLPERV 382
>Z49130-4|CAA88969.1| 280|Caenorhabditis elegans Hypothetical
protein T06D8.6 protein.
Length = 280
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 93 NSQCATRKLPRWS*TMGPECAKP 161
N++ A R++ +W + PECA+P
Sbjct: 146 NNEEAWREVLKWENLLHPECAEP 168
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +2
Query: 104 CDEEVAALVVDNGSG--MCKAGFAGDDAPRAVCPSI 205
C LV G+ +C+ GF GD VC S+
Sbjct: 229 CHNNGTCLVSQEGAATCLCRNGFTGDRCELDVCSSV 264
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +2
Query: 104 CDEEVAALVVDNGSG--MCKAGFAGDDAPRAVCPSI 205
C LV G+ +C+ GF GD VC S+
Sbjct: 229 CHNNGTCLVSQEGAATCLCRNGFTGDRCELDVCSSV 264
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +2
Query: 104 CDEEVAALVVDNGSG--MCKAGFAGDDAPRAVCPSI 205
C LV G+ +C+ GF GD VC S+
Sbjct: 229 CHNNGTCLVSQEGAATCLCRNGFTGDRCELDVCSSV 264
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +2
Query: 104 CDEEVAALVVDNGSG--MCKAGFAGDDAPRAVCPSI 205
C LV G+ +C+ GF GD VC S+
Sbjct: 229 CHNNGTCLVSQEGAATCLCRNGFTGDRCELDVCSSV 264
>Z81586-13|CAN86915.1| 563|Caenorhabditis elegans Hypothetical
protein T05F1.1b protein.
Length = 563
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 143 SGMCKAGFAGDDAPRAVCPSIVGR 214
SG+ + GF+ D A+C +GR
Sbjct: 295 SGLSRKGFSDDRVDLAICIEAIGR 318
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 177 SSPAKPALHIPDPLSTTNAATS 112
SS +KPA++ P P +T TS
Sbjct: 1568 SSTSKPAMNFPPPSISTTTTTS 1589
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 177 SSPAKPALHIPDPLSTTNAATS 112
SS +KPA++ P P +T TS
Sbjct: 1590 SSTSKPAMNFPPPSISTTTTTS 1611
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 177 SSPAKPALHIPDPLSTTNAATS 112
SS +KPA++ P P +T TS
Sbjct: 1381 SSTSKPAMNFPPPSISTTTTTS 1402
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 177 SSPAKPALHIPDPLSTTNAATS 112
SS +KPA++ P P +T TS
Sbjct: 1688 SSTSKPAMNFPPPSISTTTTTS 1709
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 177 SSPAKPALHIPDPLSTTNAATS 112
SS +KPA++ P P +T TS
Sbjct: 1568 SSTSKPAMNFPPPSISTTTTTS 1589
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 177 SSPAKPALHIPDPLSTTNAATS 112
SS +KPA++ P P +T TS
Sbjct: 1590 SSTSKPAMNFPPPSISTTTTTS 1611
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 177 SSPAKPALHIPDPLSTTNAATS 112
SS +KPA++ P P +T TS
Sbjct: 1381 SSTSKPAMNFPPPSISTTTTTS 1402
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 177 SSPAKPALHIPDPLSTTNAATS 112
SS +KPA++ P P +T TS
Sbjct: 1688 SSTSKPAMNFPPPSISTTTTTS 1709
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 177 SSPAKPALHIPDPLSTTNAATS 112
SS +KPA++ P P +T TS
Sbjct: 1399 SSTSKPAMNFPPPSISTTTTTS 1420
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 116 VAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQ 226
+ ++ DNG K G ++PR V SIV + +H+
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHE 38
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 116 VAALVVDNGSGMCKAGFAGDDAPRAVCPSIVGRPRHQ 226
+ ++ DNG K G ++PR V SIV + +H+
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHE 38
>U20861-5|AAT92079.1| 256|Caenorhabditis elegans Temporarily
assigned gene nameprotein 327, isoform b protein.
Length = 256
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 174 SPAKPALHIPDPLSTTNAATSSSHIVN 94
SP++ LH + T N SS H VN
Sbjct: 56 SPSRDPLHSDSMIGTMNGELSSKHGVN 82
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 177 SSPAKPALHIPDPLSTTNAATS 112
SS +KPA++ P P +T TS
Sbjct: 1359 SSTSKPAMNFPPPSISTTTTTS 1380
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 155 KAGFAGDDAPRAVCPSIVGRPRHQG 229
KA + G D P+A I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,968,326
Number of Sequences: 27780
Number of extensions: 82597
Number of successful extensions: 297
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 12,740,198
effective HSP length: 56
effective length of database: 11,184,518
effective search space used: 223690360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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