Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_I24
         (186 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p pro...   113   3e-26
AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-P...   113   3e-26
AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-P...   113   3e-26
D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal prot...   111   1e-25
AY060712-1|AAL28260.1|  280|Drosophila melanogaster GH15448p pro...    29   0.86 
AF435962-1|AAL31972.1|  280|Drosophila melanogaster mitochondria...    29   0.86 
AE013599-3422|AAF46869.1|  280|Drosophila melanogaster CG4207-PA...    29   0.86 
Y16899-1|CAA76529.1|  712|Drosophila melanogaster optomotor-blin...    28   1.5  
AE014298-1177|AAF46373.1|  699|Drosophila melanogaster CG11202-P...    28   1.5  
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    27   4.6  
AJ245406-1|CAB76253.1| 4001|Drosophila melanogaster kettin protein.    27   4.6  
AJ238575-1|CAB43710.1|  187|Drosophila melanogaster titin protein.     27   4.6  
AF045775-1|AAC23966.1|  880|Drosophila melanogaster titin protein.     27   4.6  
AE014296-406|AAF47604.1| 4796|Drosophila melanogaster CG1915-PA,...    27   4.6  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    27   4.6  
AB026845-1|BAA90301.2| 4796|Drosophila melanogaster kettin protein.    27   4.6  
BT009966-1|AAQ22435.1| 1091|Drosophila melanogaster RE68041p pro...    26   6.0  
AE014296-2088|AAF49966.3| 1093|Drosophila melanogaster CG5661-PA...    26   6.0  

>BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p
           protein.
          Length = 261

 Score =  113 bits (272), Expect = 3e-26
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = +3

Query: 21  MARGPKKHLKRLDAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYA 185
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYA
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYA 55


>AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-PB,
           isoform B protein.
          Length = 261

 Score =  113 bits (272), Expect = 3e-26
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = +3

Query: 21  MARGPKKHLKRLDAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYA 185
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYA
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYA 55


>AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-PA,
           isoform A protein.
          Length = 261

 Score =  113 bits (272), Expect = 3e-26
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = +3

Query: 21  MARGPKKHLKRLDAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYA 185
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYA
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYA 55


>D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal protein
           S4 protein.
          Length = 261

 Score =  111 bits (267), Expect = 1e-25
 Identities = 50/55 (90%), Positives = 52/55 (94%)
 Frame = +3

Query: 21  MARGPKKHLKRLDAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYA 185
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYA
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYA 55


>AY060712-1|AAL28260.1|  280|Drosophila melanogaster GH15448p
           protein.
          Length = 280

 Score = 29.1 bits (62), Expect = 0.86
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 39  KHLKRLDAPK-AWMLDKLGGVYAPRPS 116
           K+L+R D P+  W+L+KL  VY P P+
Sbjct: 153 KYLRRWDYPRFEWILEKLDLVYKPPPT 179


>AF435962-1|AAL31972.1|  280|Drosophila melanogaster mitochondrial
           ribosomal proteinS15 protein.
          Length = 280

 Score = 29.1 bits (62), Expect = 0.86
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 39  KHLKRLDAPK-AWMLDKLGGVYAPRPS 116
           K+L+R D P+  W+L+KL  VY P P+
Sbjct: 153 KYLRRWDYPRFEWILEKLDLVYKPPPT 179


>AE013599-3422|AAF46869.1|  280|Drosophila melanogaster CG4207-PA
           protein.
          Length = 280

 Score = 29.1 bits (62), Expect = 0.86
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 39  KHLKRLDAPK-AWMLDKLGGVYAPRPS 116
           K+L+R D P+  W+L+KL  VY P P+
Sbjct: 153 KYLRRWDYPRFEWILEKLDLVYKPPPT 179


>Y16899-1|CAA76529.1|  712|Drosophila melanogaster
           optomotor-blind-related gene-1 protein.
          Length = 712

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 151 SGKHSRSLWGPVEGRGAYTPPSLSNIHALGASKRFK 44
           +G HS +   P  G  A T  S   + A  ASK+FK
Sbjct: 124 AGVHSEASMAPTAGGTAVTTTSAGGVSASTASKKFK 159


>AE014298-1177|AAF46373.1|  699|Drosophila melanogaster CG11202-PA
           protein.
          Length = 699

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 151 SGKHSRSLWGPVEGRGAYTPPSLSNIHALGASKRFK 44
           +G HS +   P  G  A T  S   + A  ASK+FK
Sbjct: 124 AGVHSEASMAPTAGGTAVTTTSAGGVSASTASKKFK 159


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin
           protein.
          Length = 16215

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 166 RRKITSGKHSRSLWGPVEGRGAYTPPSLSNIHALG 62
           R ++T+ +  +   G   G GAY PPSL++++A G
Sbjct: 49  RSQVTTQRQVQQHHGGSIG-GAYVPPSLTHVYAQG 82


>AJ245406-1|CAB76253.1| 4001|Drosophila melanogaster kettin protein.
          Length = 4001

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 166 RRKITSGKHSRSLWGPVEGRGAYTPPSLSNIHALG 62
           R ++T+ +  +   G   G GAY PPSL++++A G
Sbjct: 49  RSQVTTQRQVQQHHGGSIG-GAYVPPSLTHVYAQG 82


>AJ238575-1|CAB43710.1|  187|Drosophila melanogaster titin protein.
          Length = 187

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 166 RRKITSGKHSRSLWGPVEGRGAYTPPSLSNIHALG 62
           R ++T+ +  +   G   G GAY PPSL++++A G
Sbjct: 49  RSQVTTQRQVQQHHGGSIG-GAYVPPSLTHVYAQG 82


>AF045775-1|AAC23966.1|  880|Drosophila melanogaster titin protein.
          Length = 880

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 166 RRKITSGKHSRSLWGPVEGRGAYTPPSLSNIHALG 62
           R ++T+ +  +   G   G GAY PPSL++++A G
Sbjct: 49  RSQVTTQRQVQQHHGGSIG-GAYVPPSLTHVYAQG 82


>AE014296-406|AAF47604.1| 4796|Drosophila melanogaster CG1915-PA,
           isoform A protein.
          Length = 4796

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 166 RRKITSGKHSRSLWGPVEGRGAYTPPSLSNIHALG 62
           R ++T+ +  +   G   G GAY PPSL++++A G
Sbjct: 49  RSQVTTQRQVQQHHGGSIG-GAYVPPSLTHVYAQG 82


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
           isoform C protein.
          Length = 18074

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 166 RRKITSGKHSRSLWGPVEGRGAYTPPSLSNIHALG 62
           R ++T+ +  +   G   G GAY PPSL++++A G
Sbjct: 49  RSQVTTQRQVQQHHGGSIG-GAYVPPSLTHVYAQG 82


>AB026845-1|BAA90301.2| 4796|Drosophila melanogaster kettin protein.
          Length = 4796

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 166 RRKITSGKHSRSLWGPVEGRGAYTPPSLSNIHALG 62
           R ++T+ +  +   G   G GAY PPSL++++A G
Sbjct: 49  RSQVTTQRQVQQHHGGSIG-GAYVPPSLTHVYAQG 82


>BT009966-1|AAQ22435.1| 1091|Drosophila melanogaster RE68041p
           protein.
          Length = 1091

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = +1

Query: 34  QRST*SV*TPLKHG---CWTSWAACT 102
           Q S+ S+   L+HG   CW+ W+AC+
Sbjct: 836 QLSSNSLDNELEHGEWGCWSEWSACS 861


>AE014296-2088|AAF49966.3| 1093|Drosophila melanogaster CG5661-PA
           protein.
          Length = 1093

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = +1

Query: 34  QRST*SV*TPLKHG---CWTSWAACT 102
           Q S+ S+   L+HG   CW+ W+AC+
Sbjct: 838 QLSSNSLDNELEHGEWGCWSEWSACS 863


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,899,845
Number of Sequences: 53049
Number of extensions: 123629
Number of successful extensions: 381
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 24,988,368
effective HSP length: 42
effective length of database: 22,760,310
effective search space used: 432445890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)