BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_I22
(183 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein. 25 0.42
DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein. 22 3.0
AY341209-1|AAR13773.1| 196|Anopheles gambiae SP14D1 protein. 22 3.0
AY341208-1|AAR13772.1| 196|Anopheles gambiae SP14D1 protein. 22 3.0
AY341207-1|AAR13771.1| 196|Anopheles gambiae SP14D1 protein. 22 3.0
AY341206-1|AAR13770.1| 196|Anopheles gambiae SP14D1 protein. 22 3.0
AF007166-1|AAB62929.1| 360|Anopheles gambiae serine protease 14... 22 3.0
AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase... 21 5.2
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 20 9.1
AY324309-1|AAQ89694.1| 160|Anopheles gambiae insulin-like pepti... 20 9.1
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 20 9.1
>AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein.
Length = 506
Score = 24.6 bits (51), Expect = 0.42
Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -3
Query: 85 PLCTPLIGWRSTAPDTTS--AWG 23
P+ L+GWR +PD ++ WG
Sbjct: 7 PIVKRLLGWRKVSPDDSAEGKWG 29
>DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein.
Length = 847
Score = 21.8 bits (44), Expect = 3.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 94 TLIPLCTPLIGWRSTAPDTTSAWGSFTTTL 5
T P + L STA +++S + TTTL
Sbjct: 799 TFKPFASRLRATESTATESSSTLSTVTTTL 828
>AY341209-1|AAR13773.1| 196|Anopheles gambiae SP14D1 protein.
Length = 196
Score = 21.8 bits (44), Expect = 3.0
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +3
Query: 75 VHKGMRVRNRAHHHRSAVI 131
VH G +++++HH+ A+I
Sbjct: 35 VHPGYNLQDKSHHNDIALI 53
>AY341208-1|AAR13772.1| 196|Anopheles gambiae SP14D1 protein.
Length = 196
Score = 21.8 bits (44), Expect = 3.0
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +3
Query: 75 VHKGMRVRNRAHHHRSAVI 131
VH G +++++HH+ A+I
Sbjct: 35 VHPGYNLQDKSHHNDIALI 53
>AY341207-1|AAR13771.1| 196|Anopheles gambiae SP14D1 protein.
Length = 196
Score = 21.8 bits (44), Expect = 3.0
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +3
Query: 75 VHKGMRVRNRAHHHRSAVI 131
VH G +++++HH+ A+I
Sbjct: 35 VHPGYNLQDKSHHNDIALI 53
>AY341206-1|AAR13770.1| 196|Anopheles gambiae SP14D1 protein.
Length = 196
Score = 21.8 bits (44), Expect = 3.0
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +3
Query: 75 VHKGMRVRNRAHHHRSAVI 131
VH G +++++HH+ A+I
Sbjct: 35 VHPGYNLQDKSHHNDIALI 53
>AF007166-1|AAB62929.1| 360|Anopheles gambiae serine protease 14D
protein.
Length = 360
Score = 21.8 bits (44), Expect = 3.0
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +3
Query: 75 VHKGMRVRNRAHHHRSAVI 131
VH G +++++HH+ A+I
Sbjct: 199 VHPGYNLQDKSHHNDIALI 217
>AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase
protein.
Length = 309
Score = 21.0 bits (42), Expect = 5.2
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 68 QWGAQGDEGQEQS 106
+WG Q D G+ QS
Sbjct: 39 RWGGQCDNGRRQS 51
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 20.2 bits (40), Expect = 9.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 96 RNRAHHHRSAVI 131
R+ HHH SA++
Sbjct: 432 RHHHHHHHSALV 443
>AY324309-1|AAQ89694.1| 160|Anopheles gambiae insulin-like peptide
3 precursor protein.
Length = 160
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -2
Query: 104 SVPDPHPLVHPIDWVEVHGARHH 36
+VP +V+P +++ HGA H+
Sbjct: 100 AVPAWMNMVYPTNYMYRHGAGHN 122
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 20.2 bits (40), Expect = 9.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 161 DVRRGSYDGNYNCAAVVVRSVPDPHPLVHPIDWVEVH 51
D GS+D N A VV R+ + + ID VH
Sbjct: 157 DREDGSFDEVPNSAFVVARTAFRDNSSYYTIDNKRVH 193
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,310
Number of Sequences: 2352
Number of extensions: 2494
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 39
effective length of database: 472,251
effective search space used: 9917271
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -