Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_I22
         (183 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ438879-1|ABE66436.1|  350|Homo sapiens GLIS family zinc finger...    29   3.5  
DQ438878-1|ABE66435.1|  438|Homo sapiens GLIS family zinc finger...    29   3.5  
DQ438877-1|ABE66434.1|  930|Homo sapiens GLIS family zinc finger...    29   3.5  
BC033899-1|AAH33899.2|  775|Homo sapiens GLIS family zinc finger...    29   3.5  
AL158012-1|CAH70655.1|  775|Homo sapiens GLIS family zinc finger...    29   3.5  
AL137071-1|CAI39818.1|  775|Homo sapiens GLIS family zinc finger...    29   3.5  
AL133283-1|CAH72449.1|  775|Homo sapiens GLIS family zinc finger...    29   3.5  
AB209404-1|BAD92641.1|  370|Homo sapiens GLIS family zinc finger...    29   3.5  

>DQ438879-1|ABE66436.1|  350|Homo sapiens GLIS family zinc finger 3
           transcript variant TE1 protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 143 YDGNYNC-AAVVVRSVPDPHPLVHPIDWVEVHGARHH 36
           +  NY+  +     +VP PHP+ HP     V G+ H+
Sbjct: 226 FSSNYSSRSGTAAGAVPPPHPVSHPSPGHNVQGSPHN 262


>DQ438878-1|ABE66435.1|  438|Homo sapiens GLIS family zinc finger 3
           transcript variant TS1 protein.
          Length = 438

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 143 YDGNYNC-AAVVVRSVPDPHPLVHPIDWVEVHGARHH 36
           +  NY+  +     +VP PHP+ HP     V G+ H+
Sbjct: 221 FSSNYSSRSGTAAGAVPPPHPVSHPSPGHNVQGSPHN 257


>DQ438877-1|ABE66434.1|  930|Homo sapiens GLIS family zinc finger 3
           transcript variant long T1 protein.
          Length = 930

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 143 YDGNYNC-AAVVVRSVPDPHPLVHPIDWVEVHGARHH 36
           +  NY+  +     +VP PHP+ HP     V G+ H+
Sbjct: 713 FSSNYSSRSGTAAGAVPPPHPVSHPSPGHNVQGSPHN 749


>BC033899-1|AAH33899.2|  775|Homo sapiens GLIS family zinc finger 3
           protein.
          Length = 775

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 143 YDGNYNC-AAVVVRSVPDPHPLVHPIDWVEVHGARHH 36
           +  NY+  +     +VP PHP+ HP     V G+ H+
Sbjct: 558 FSSNYSSRSGTAAGAVPPPHPVSHPSPGHNVQGSPHN 594


>AL158012-1|CAH70655.1|  775|Homo sapiens GLIS family zinc finger 3
           protein.
          Length = 775

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 143 YDGNYNC-AAVVVRSVPDPHPLVHPIDWVEVHGARHH 36
           +  NY+  +     +VP PHP+ HP     V G+ H+
Sbjct: 558 FSSNYSSRSGTAAGAVPPPHPVSHPSPGHNVQGSPHN 594


>AL137071-1|CAI39818.1|  775|Homo sapiens GLIS family zinc finger 3
           protein.
          Length = 775

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 143 YDGNYNC-AAVVVRSVPDPHPLVHPIDWVEVHGARHH 36
           +  NY+  +     +VP PHP+ HP     V G+ H+
Sbjct: 558 FSSNYSSRSGTAAGAVPPPHPVSHPSPGHNVQGSPHN 594


>AL133283-1|CAH72449.1|  775|Homo sapiens GLIS family zinc finger 3
           protein.
          Length = 775

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 143 YDGNYNC-AAVVVRSVPDPHPLVHPIDWVEVHGARHH 36
           +  NY+  +     +VP PHP+ HP     V G+ H+
Sbjct: 558 FSSNYSSRSGTAAGAVPPPHPVSHPSPGHNVQGSPHN 594


>AB209404-1|BAD92641.1|  370|Homo sapiens GLIS family zinc finger 3
           variant protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 143 YDGNYNC-AAVVVRSVPDPHPLVHPIDWVEVHGARHH 36
           +  NY+  +     +VP PHP+ HP     V G+ H+
Sbjct: 153 FSSNYSSRSGTAAGAVPPPHPVSHPSPGHNVQGSPHN 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,486,941
Number of Sequences: 237096
Number of extensions: 380811
Number of successful extensions: 1103
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 76,859,062
effective HSP length: 40
effective length of database: 67,375,222
effective search space used: 1347504440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)