Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_I18
(240 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043699-3|AAB97566.1| 1220|Caenorhabditis elegans Temporarily a... 53 2e-08
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 28 1.0
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 28 1.0
U40945-3|AAA81721.2| 146|Caenorhabditis elegans Hypothetical pr... 27 1.8
U53335-1|AAA96169.1| 431|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 26 4.1
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 26 4.1
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 26 4.1
AF025470-2|AAB71055.1| 199|Caenorhabditis elegans Hypothetical ... 26 4.1
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p... 25 7.2
U41016-8|ABC71806.1| 212|Caenorhabditis elegans Hypothetical pr... 25 7.2
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical... 25 7.2
AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical ... 25 7.2
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 25 9.5
AF067216-4|AAC17526.1| 262|Caenorhabditis elegans Hypothetical ... 25 9.5
AF067216-3|AAC17525.1| 430|Caenorhabditis elegans Hypothetical ... 25 9.5
>AF043699-3|AAB97566.1| 1220|Caenorhabditis elegans Temporarily
assigned gene nameprotein 203 protein.
Length = 1220
Score = 53.2 bits (122), Expect = 2e-08
Identities = 30/75 (40%), Positives = 40/75 (53%)
Frame = +1
Query: 10 EKLGAVFNQTYLPLDYTPRKFVINSDSNHIIILETDHNSYTEDMKKQRRVQMAQEMREAA 189
EKLG FN TPR+ ++ +I++ETDH SYTE K +R QMA ++ A
Sbjct: 761 EKLGVAFNVQSFEHKMTPRRVAVHPSMPCLIVIETDHASYTEVTKNIKRNQMAADVE--A 818
Query: 190 AGGGPEEQQLANEMA 234
E QLA E+A
Sbjct: 819 MASDETEAQLAQEIA 833
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 82 SDSNHIIILETDHNSYTEDMKKQRRVQMAQE 174
+ +NHIII + D N Y + + R +M QE
Sbjct: 838 TSANHIIIHDIDFNPYNDKQAEDRCHRMGQE 868
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 82 SDSNHIIILETDHNSYTEDMKKQRRVQMAQE 174
+ +NHIII + D N Y + + R +M QE
Sbjct: 838 TSANHIIIHDIDFNPYNDKQAEDRCHRMGQE 868
>U40945-3|AAA81721.2| 146|Caenorhabditis elegans Hypothetical
protein F10D7.3 protein.
Length = 146
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +1
Query: 25 VFNQTYLPLDYTPRKFVINSDSNHIIILETDHNSYTEDMKK 147
V+++TY P + + N + + + I+E D ++ TE+M++
Sbjct: 48 VYSKTYCPWSKRLKAILANYEIDDMKIVELDRSNQTEEMQE 88
>U53335-1|AAA96169.1| 431|Caenorhabditis elegans Hypothetical
protein C55C3.4 protein.
Length = 431
Score = 26.2 bits (55), Expect = 3.1
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Frame = +1
Query: 13 KLGAVFNQTYLPLDYTPRKFVI------NSDSNHIIILETDHNSYTE 135
K G +T P+ R+FV+ N+ +NH ++ E DH Y +
Sbjct: 27 KPGQFLLRTSEPVKGEKRQFVLSVVGEKNTSANHFVVREADHKVYVD 73
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 58 TPRKFVINSDSNHIIILETDHNSYTEDMKKQRRVQMAQE 174
TPR ++ DS L + Y E +KK+R AQE
Sbjct: 547 TPRSGRVSLDSESARRLSAGLSHYLEQVKKERESMEAQE 585
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 58 TPRKFVINSDSNHIIILETDHNSYTEDMKKQRRVQMAQE 174
TPR ++ DS L + Y E +KK+R AQE
Sbjct: 545 TPRSGRVSLDSESARRLSAGLSHYLEQVKKERESMEAQE 583
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 58 TPRKFVINSDSNHIIILETDHNSYTEDMKKQRRVQMAQE 174
TPR ++ DS L + Y E +KK+R AQE
Sbjct: 547 TPRSGRVSLDSESARRLSAGLSHYLEQVKKERESMEAQE 585
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 58 TPRKFVINSDSNHIIILETDHNSYTEDMKKQRRVQMAQE 174
TPR ++ DS L + Y E +KK+R AQE
Sbjct: 545 TPRSGRVSLDSESARRLSAGLSHYLEQVKKERESMEAQE 583
>AF025470-2|AAB71055.1| 199|Caenorhabditis elegans Hypothetical
protein W10D9.1 protein.
Length = 199
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -2
Query: 203 GPPPAAASRISCAIWTLLCFFISSV*ELWSVSRIII-WLLSELITNFL 63
G P + + ++ A++ LLC+ + L ++ ++++ +LL +IT FL
Sbjct: 98 GSPHLSVTSLASALFLLLCYCVDQYYFLRTIFKMLLDYLLLLIITAFL 145
>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +1
Query: 139 MKKQRRVQMAQEMREAAAGGGPEEQQLANE 228
+KK + + + +E + GGG E++++A E
Sbjct: 486 LKKLQSIVLTEEKQHENGGGGTEQKEMALE 515
>U41016-8|ABC71806.1| 212|Caenorhabditis elegans Hypothetical
protein R11G1.2 protein.
Length = 212
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 85 DSNHIIILETDHNSYTEDMKKQRRVQMAQEMREAA 189
D N E HN+ + KK++ +++A+E+ E A
Sbjct: 50 DENENTGEEAKHNAEIQRQKKEKDIEIAEEVVEKA 84
>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +1
Query: 139 MKKQRRVQMAQEMREAAAGGGPEEQQLANE 228
+KK + + + +E + GGG E++++A E
Sbjct: 486 LKKLQSIVLTEEKQHENGGGGTEQKEMALE 515
>AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical
protein M151.1 protein.
Length = 402
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 155 ESKWHKRCEKLQLEVDLKSNN 217
ES W RC +L+ E++ SNN
Sbjct: 205 ESYWKTRCLQLEQEMEKLSNN 225
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +1
Query: 37 TYLPLDYTPRKFVINSDSN----HIIILETDHNSYTEDMKKQRRVQMAQEMREAAAGGGP 204
T P+ ++ + + +N D+ ++ ++ H + M++Q Q AQ+ AAA
Sbjct: 365 TQQPIRFSQQHYQVNLDNQPSTGQVLQMQMQHQKRMKQMQEQ---QAAQQAAAAAAAQQQ 421
Query: 205 EEQQ 216
++QQ
Sbjct: 422 QQQQ 425
>AF067216-4|AAC17526.1| 262|Caenorhabditis elegans Hypothetical
protein C35E7.10b protein.
Length = 262
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Frame = +1
Query: 13 KLGAVFNQTYLPLDYTPRKFVIN------SDSNHIIILETDHNSYTE 135
K G +T P+ R+FV++ + +NH ++ E+DH Y +
Sbjct: 27 KPGQFLLRTSEPVKGEKRQFVLSVVGEKKTSANHFVVRESDHKVYVD 73
>AF067216-3|AAC17525.1| 430|Caenorhabditis elegans Hypothetical
protein C35E7.10a protein.
Length = 430
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Frame = +1
Query: 13 KLGAVFNQTYLPLDYTPRKFVIN------SDSNHIIILETDHNSYTE 135
K G +T P+ R+FV++ + +NH ++ E+DH Y +
Sbjct: 27 KPGQFLLRTSEPVKGEKRQFVLSVVGEKKTSANHFVVRESDHKVYVD 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.128 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,783,014
Number of Sequences: 27780
Number of extensions: 69494
Number of successful extensions: 180
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 12,740,198
effective HSP length: 59
effective length of database: 11,101,178
effective search space used: 222023560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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