Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_I17
(218 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006863-1|AAP35509.1| 266|Homo sapiens integral membrane prote... 30 1.2
BC016148-1|AAH16148.1| 266|Homo sapiens integral membrane prote... 30 1.2
BC000554-1|AAH00554.1| 266|Homo sapiens integral membrane prote... 30 1.2
AY341247-1|AAP88930.1| 266|Homo sapiens integral membrane prote... 30 1.2
AL139322-1|CAH71156.1| 266|Homo sapiens integral membrane prote... 30 1.2
AK000503-1|BAA91210.1| 266|Homo sapiens protein ( Homo sapiens ... 30 1.2
AF246221-1|AAF66130.1| 277|Homo sapiens transmembrane protein B... 30 1.2
AF152462-1|AAD45280.1| 266|Homo sapiens transmembrane protein B... 30 1.2
AF136973-1|AAG49434.1| 266|Homo sapiens putative transmembrane ... 30 1.2
AF086918-1|AAP97148.1| 266|Homo sapiens E3-16 protein. 30 1.2
CR456875-1|CAG33156.1| 263|Homo sapiens ITM2A protein. 30 1.5
BC040437-1|AAH40437.1| 263|Homo sapiens integral membrane prote... 30 1.5
AY359051-1|AAQ89410.1| 263|Homo sapiens E25 protein. 30 1.5
AL021786-1|CAI43020.1| 263|Homo sapiens integral membrane prote... 30 1.5
AL009028-1|CAI42363.1| 263|Homo sapiens integral membrane prote... 30 1.5
AK223327-1|BAD97047.1| 263|Homo sapiens integral membrane prote... 30 1.5
>BT006863-1|AAP35509.1| 266|Homo sapiens integral membrane protein
2B protein.
Length = 266
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 58 LQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
L Y +P ++ +P RNLL + + +K YLP
Sbjct: 161 LDKCYVIPLNTSIVMPPRNLLELLINIKAGTYLP 194
>BC016148-1|AAH16148.1| 266|Homo sapiens integral membrane protein
2B protein.
Length = 266
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 58 LQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
L Y +P ++ +P RNLL + + +K YLP
Sbjct: 161 LDKCYVIPLNTSIVMPPRNLLELLINIKAGTYLP 194
>BC000554-1|AAH00554.1| 266|Homo sapiens integral membrane protein
2B protein.
Length = 266
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 58 LQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
L Y +P ++ +P RNLL + + +K YLP
Sbjct: 161 LDKCYVIPLNTSIVMPPRNLLELLINIKAGTYLP 194
>AY341247-1|AAP88930.1| 266|Homo sapiens integral membrane protein
2B protein.
Length = 266
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 58 LQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
L Y +P ++ +P RNLL + + +K YLP
Sbjct: 161 LDKCYVIPLNTSIVMPPRNLLELLINIKAGTYLP 194
>AL139322-1|CAH71156.1| 266|Homo sapiens integral membrane protein
2B protein.
Length = 266
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 58 LQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
L Y +P ++ +P RNLL + + +K YLP
Sbjct: 161 LDKCYVIPLNTSIVMPPRNLLELLINIKAGTYLP 194
>AK000503-1|BAA91210.1| 266|Homo sapiens protein ( Homo sapiens
cDNA FLJ20496 fis, clone KAT08729. ).
Length = 266
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 58 LQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
L Y +P ++ +P RNLL + + +K YLP
Sbjct: 161 LDKCYVIPLNTSIVMPPRNLLELLINIKAGTYLP 194
>AF246221-1|AAF66130.1| 277|Homo sapiens transmembrane protein BRI
protein.
Length = 277
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 58 LQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
L Y +P ++ +P RNLL + + +K YLP
Sbjct: 161 LDKCYVIPLNTSIVMPPRNLLELLINIKAGTYLP 194
>AF152462-1|AAD45280.1| 266|Homo sapiens transmembrane protein BRI
protein.
Length = 266
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 58 LQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
L Y +P ++ +P RNLL + + +K YLP
Sbjct: 161 LDKCYVIPLNTSIVMPPRNLLELLINIKAGTYLP 194
>AF136973-1|AAG49434.1| 266|Homo sapiens putative transmembrane
protein E3-16 protein.
Length = 266
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 58 LQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
L Y +P ++ +P RNLL + + +K YLP
Sbjct: 161 LDKCYVIPLNTSIVMPPRNLLELLINIKAGTYLP 194
>AF086918-1|AAP97148.1| 266|Homo sapiens E3-16 protein.
Length = 266
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 58 LQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
L Y +P ++ +P RNLL + + +K YLP
Sbjct: 161 LDKCYVIPLNTSIVMPPRNLLELLINIKAGTYLP 194
>CR456875-1|CAG33156.1| 263|Homo sapiens ITM2A protein.
Length = 263
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 52 VILQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
++L N Y +P ++ +P +NL+ +F K+ YLP
Sbjct: 155 LLLGNCYLMPLNTSIVMPPKNLVELFGKLASGRYLP 190
>BC040437-1|AAH40437.1| 263|Homo sapiens integral membrane protein
2A protein.
Length = 263
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 52 VILQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
++L N Y +P ++ +P +NL+ +F K+ YLP
Sbjct: 155 LLLGNCYLMPLNTSIVMPPKNLVELFGKLASGRYLP 190
>AY359051-1|AAQ89410.1| 263|Homo sapiens E25 protein.
Length = 263
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 52 VILQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
++L N Y +P ++ +P +NL+ +F K+ YLP
Sbjct: 155 LLLGNCYLMPLNTSIVMPPKNLVELFGKLASGRYLP 190
>AL021786-1|CAI43020.1| 263|Homo sapiens integral membrane protein
2A protein.
Length = 263
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 52 VILQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
++L N Y +P ++ +P +NL+ +F K+ YLP
Sbjct: 155 LLLGNCYLMPLNTSIVMPPKNLVELFGKLASGRYLP 190
>AL009028-1|CAI42363.1| 263|Homo sapiens integral membrane protein
2A protein.
Length = 263
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 52 VILQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
++L N Y +P ++ +P +NL+ +F K+ YLP
Sbjct: 155 LLLGNCYLMPLNTSIVMPPKNLVELFGKLASGRYLP 190
>AK223327-1|BAD97047.1| 263|Homo sapiens integral membrane protein
2A variant protein.
Length = 263
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 52 VILQNKYFLPYSSWATVPKRNLLLIFVKVKQNLYLP 159
++L N Y +P ++ +P +NL+ +F K+ YLP
Sbjct: 155 LLLGNCYLMPLNTSIVMPPKNLVELFGKLASGRYLP 190
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,616,523
Number of Sequences: 237096
Number of extensions: 443730
Number of successful extensions: 531
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 76,859,062
effective HSP length: 51
effective length of database: 64,767,166
effective search space used: 1360110486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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