Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_I15
         (252 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            24   0.98 
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    21   5.2  
AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding pr...    21   6.9  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 23.8 bits (49), Expect = 0.98
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 220 GKNSTALTFTRGKFHRH 170
           GK+S  L F +G+FH +
Sbjct: 36  GKSSLVLRFVKGQFHEY 52


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 48  DRDLFINFTLF 80
           DR+ FIN TLF
Sbjct: 281 DRNFFINITLF 291


>AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP29 protein.
          Length = 176

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 155 KDSDDVSMKFSTC 193
           KD  D SM+F TC
Sbjct: 144 KDKCDYSMRFVTC 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,261
Number of Sequences: 2352
Number of extensions: 4277
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 13179690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)