Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_I15
         (252 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047728-1|AAH47728.1|  330|Homo sapiens AKAP12 protein protein.       28   6.3  
AL590413-3|CAI13590.1| 1782|Homo sapiens A kinase (PRKA) anchor ...    28   6.3  
AL356535-2|CAI16151.1| 1782|Homo sapiens A kinase (PRKA) anchor ...    28   6.3  
AL033392-1|CAI20467.1| 1782|Homo sapiens A kinase (PRKA) anchor ...    28   6.3  
U81607-1|AAC51366.1| 1781|Homo sapiens gravin protein.                 27   8.3  
AF001504-1|AAB58938.1| 1741|Homo sapiens myasthenia gravis autoa...    27   8.3  
AB210003-1|BAE06085.1| 1791|Homo sapiens AKAP12 variant protein ...    27   8.3  

>BC047728-1|AAH47728.1|  330|Homo sapiens AKAP12 protein protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 89  MSNNGAPDSWESQADVIGEQGAKDSDDVSMKFSTCE 196
           ++  GA +S E +  ++ E G +DS+DVS + S  E
Sbjct: 88  LNGQGALNSQEEEEVIVTEVGQRDSEDVSKRDSDKE 123


>AL590413-3|CAI13590.1| 1782|Homo sapiens A kinase (PRKA) anchor
           protein (gravin) 12 protein.
          Length = 1782

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 89  MSNNGAPDSWESQADVIGEQGAKDSDDVSMKFSTCE 196
           ++  GA +S E +  ++ E G +DS+DVS + S  E
Sbjct: 88  LNGQGALNSQEEEEVIVTEVGQRDSEDVSKRDSDKE 123


>AL356535-2|CAI16151.1| 1782|Homo sapiens A kinase (PRKA) anchor
           protein (gravin) 12 protein.
          Length = 1782

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 89  MSNNGAPDSWESQADVIGEQGAKDSDDVSMKFSTCE 196
           ++  GA +S E +  ++ E G +DS+DVS + S  E
Sbjct: 88  LNGQGALNSQEEEEVIVTEVGQRDSEDVSKRDSDKE 123


>AL033392-1|CAI20467.1| 1782|Homo sapiens A kinase (PRKA) anchor
           protein (gravin) 12 protein.
          Length = 1782

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 89  MSNNGAPDSWESQADVIGEQGAKDSDDVSMKFSTCE 196
           ++  GA +S E +  ++ E G +DS+DVS + S  E
Sbjct: 88  LNGQGALNSQEEEEVIVTEVGQRDSEDVSKRDSDKE 123


>U81607-1|AAC51366.1| 1781|Homo sapiens gravin protein.
          Length = 1781

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 89  MSNNGAPDSWESQADVIGEQGAKDSDDVSMKFSTCE 196
           ++  GA +S E +  ++ E G +DS+DVS + S  E
Sbjct: 88  LNGQGALNSQEEEEVIVTEVGQRDSEDVSERDSDKE 123


>AF001504-1|AAB58938.1| 1741|Homo sapiens myasthenia gravis
           autoantigen gravin protein.
          Length = 1741

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 89  MSNNGAPDSWESQADVIGEQGAKDSDDVSMKFSTCE 196
           ++  GA +S E +  ++ E G +DS+DVS + S  E
Sbjct: 46  LNGQGALNSQEEEEVIVTEVGQRDSEDVSERDSDKE 81


>AB210003-1|BAE06085.1| 1791|Homo sapiens AKAP12 variant protein
           protein.
          Length = 1791

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 89  MSNNGAPDSWESQADVIGEQGAKDSDDVSMKFSTCE 196
           ++  GA +S E +  ++ E G +DS+DVS + S  E
Sbjct: 96  LNGQGALNSQEEEEVIVTEVGQRDSEDVSERDSDKE 131


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,931,143
Number of Sequences: 237096
Number of extensions: 530303
Number of successful extensions: 727
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 76,859,062
effective HSP length: 61
effective length of database: 62,396,206
effective search space used: 1372716532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)