BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_I15
(252 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012491-1|AAS93762.1| 1074|Drosophila melanogaster LD02554p pro... 28 2.0
AY118761-1|AAM50621.1| 1028|Drosophila melanogaster GH09271p pro... 28 2.0
AE013599-3729|AAM68277.1| 1028|Drosophila melanogaster CG5594-PB... 28 2.0
AE013599-3728|AAF47099.2| 1059|Drosophila melanogaster CG5594-PC... 28 2.0
AE013599-3727|AAF47098.2| 1043|Drosophila melanogaster CG5594-PA... 28 2.0
AE013599-3726|AAM68276.1| 1074|Drosophila melanogaster CG5594-PD... 28 2.0
AF184227-1|AAD55738.1| 970|Drosophila melanogaster LD23194p pro... 26 8.0
AE014298-3116|AAF50831.4| 970|Drosophila melanogaster CG1693-PA... 26 8.0
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC... 26 8.0
>BT012491-1|AAS93762.1| 1074|Drosophila melanogaster LD02554p
protein.
Length = 1074
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 220 GKNSTALTFTRGKFHRHIIGIFCTLFTYNIGLTFPRVWSTVIG 92
GK++ + T G+ + I+ T FT IG+ FP V + G
Sbjct: 370 GKSAIDIENTSGESYNQIMADITTSFTLLIGIFFPSVTGIMAG 412
>AY118761-1|AAM50621.1| 1028|Drosophila melanogaster GH09271p
protein.
Length = 1028
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 220 GKNSTALTFTRGKFHRHIIGIFCTLFTYNIGLTFPRVWSTVIG 92
GK++ + T G+ + I+ T FT IG+ FP V + G
Sbjct: 355 GKSAIDIENTSGESYNQIMADITTSFTLLIGIFFPSVTGIMAG 397
>AE013599-3729|AAM68277.1| 1028|Drosophila melanogaster CG5594-PB,
isoform B protein.
Length = 1028
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 220 GKNSTALTFTRGKFHRHIIGIFCTLFTYNIGLTFPRVWSTVIG 92
GK++ + T G+ + I+ T FT IG+ FP V + G
Sbjct: 355 GKSAIDIENTSGESYNQIMADITTSFTLLIGIFFPSVTGIMAG 397
>AE013599-3728|AAF47099.2| 1059|Drosophila melanogaster CG5594-PC,
isoform C protein.
Length = 1059
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 220 GKNSTALTFTRGKFHRHIIGIFCTLFTYNIGLTFPRVWSTVIG 92
GK++ + T G+ + I+ T FT IG+ FP V + G
Sbjct: 355 GKSAIDIENTSGESYNQIMADITTSFTLLIGIFFPSVTGIMAG 397
>AE013599-3727|AAF47098.2| 1043|Drosophila melanogaster CG5594-PA,
isoform A protein.
Length = 1043
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 220 GKNSTALTFTRGKFHRHIIGIFCTLFTYNIGLTFPRVWSTVIG 92
GK++ + T G+ + I+ T FT IG+ FP V + G
Sbjct: 370 GKSAIDIENTSGESYNQIMADITTSFTLLIGIFFPSVTGIMAG 412
>AE013599-3726|AAM68276.1| 1074|Drosophila melanogaster CG5594-PD,
isoform D protein.
Length = 1074
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 220 GKNSTALTFTRGKFHRHIIGIFCTLFTYNIGLTFPRVWSTVIG 92
GK++ + T G+ + I+ T FT IG+ FP V + G
Sbjct: 370 GKSAIDIENTSGESYNQIMADITTSFTLLIGIFFPSVTGIMAG 412
>AF184227-1|AAD55738.1| 970|Drosophila melanogaster LD23194p
protein.
Length = 970
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 83 LKMSNNGAPDSWESQADVIGEQGAKDSDDVSM 178
L SN G P ++ V+G GA ++D S+
Sbjct: 871 LNESNGGVPSGLQNGGAVVGGGGANANEDTSL 902
>AE014298-3116|AAF50831.4| 970|Drosophila melanogaster CG1693-PA,
isoform A protein.
Length = 970
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 83 LKMSNNGAPDSWESQADVIGEQGAKDSDDVSM 178
L SN G P ++ V+G GA ++D S+
Sbjct: 871 LNESNGGVPSGLQNGGAVVGGGGANANEDTSL 902
>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
protein.
Length = 4699
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 89 MSNNGAPDSWESQADVIGEQGAKDSDDVSMK 181
+S +G + +VIG GAKD+D V+ K
Sbjct: 251 LSRDGVQSVGTNGTEVIGPPGAKDNDKVTDK 281
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,338,986
Number of Sequences: 53049
Number of extensions: 166078
Number of successful extensions: 269
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 24,988,368
effective HSP length: 63
effective length of database: 21,646,281
effective search space used: 432925620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -